Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GWCH70_3389 |
Symbol | |
ID | 7976170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacillus sp. WCH70 |
Kingdom | Bacteria |
Replicon accession | NC_012793 |
Strand | + |
Start bp | 3415980 |
End bp | 3417374 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644800154 |
Product | amino acid permease-associated region |
Protein accession | YP_002951293 |
Protein GI | 239828669 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAACTC CAAAAAATGA ACAAAAATTA CATCGTGGAT TAGAGGAAAG ACATATTTCT CTTATGTCTC TTGGGGCAGC GATTGGGGTC GGGCTATTTC TTGGCTCTGC ATCTTCCATC AAATTAGCGG GACCAGCCAT TTTGATTGCT TATGCGGTAA GCGGCGCGGT CATGTTCTTG ATTATGCGCG CACTCGGCGA AATGGCCGTG GAAAACCCGG TTGCCGGTTC ATTCAGCCGC TACGCGCATG ACTATTTAGG ACCGCTTGCT GGTTATTTAA CCGGGTGGAA CTATTGGTTT TTATGGGTAG TTACTTGCAT CGCGGAAATC ACCGCTGCCG GCATTTATAT GCAATTTTGG TTCCCTGATA CGCCAAGATG GATATGGGCG CTAGCCGCTT TAATAATGAT GACATTAATC AATTTCCTCG CTGTCAAGGC GTACGGGGAA TTAGAATTTT GGTTTGCGCT TATTAAAATT GTCACCATTG TATTTATGAT CATCGTTGGC TTGGGCATGA TTCTGTTCGG AATCGGCAAT GGCGGAGTCG CCACAGGCAT CAGCAACCTT TGGGAACATG GCGGATTTCT CCCGAACGGC TTTACCGGTG TGTTAATGTC TTTGCAAATG GTGATGTTCG CCTACTTAGG AATTGAAATG CTCGGCGTTA CGGCCGGAGA AGTAAAAAAT CCGGAGAAAT CGCTTACCCG CGCAATCAAT ACGGTCTTTT GGCGCATTTT AATTTTCTAC GTGGGCGCAT TATTTGTCAT CATGTCCATT TACCCTTGGA ACGAAATCGG CGAAAAAGGA AGCCCGTTTG TCTTAACATT TGAAAAAATC GGCATTCACG CCGCTGCGGG AATCATCAAC TTTGTCGTTT TAACGGCTGC GTTGTCTTCC TGCAACAGTG GAATTTTCAG CACAAGCCGC ATGCTCTTCA ACTTGGCTGA GCAAAAAGAA GCACCGCCTT CCTTCGCTAA ACTGACAAAG CGCGGAATTC CAGGCGTCGC CCTCATCGTC ACGGCGTTAG CGATGTTAGT CGGTGTGTAT TTAAACTACG TTTCCGAAAA AGTATTCCAA TGGGTCACAA GTGTCGCGAC ATTTGGCGCG ATTTGGACAT GGGCGATTAT TTTGCTTTCG CAATTGCACT TCCGTAAACG CTTAAGCCCA GAAAAGCAAA AACAATTAAA GTATAAAATG CCGCTTTATC CTTATAGCTC TTATATCGCT CTCGCCTTTT TAGTCGGAGT TGTCGGTTTA ATGGCATATT TCCCTGACAC ACGAATCGCA CTTATCATTG GACCAGCCTG GCTCATCTTG CTCGTTGTCG TCTATTATGC AAAAGGCATG CATAAGCGCC ATGCCTACCC TTCTGATAAA AAACAAGTTA GCTAA
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Protein sequence | MQTPKNEQKL HRGLEERHIS LMSLGAAIGV GLFLGSASSI KLAGPAILIA YAVSGAVMFL IMRALGEMAV ENPVAGSFSR YAHDYLGPLA GYLTGWNYWF LWVVTCIAEI TAAGIYMQFW FPDTPRWIWA LAALIMMTLI NFLAVKAYGE LEFWFALIKI VTIVFMIIVG LGMILFGIGN GGVATGISNL WEHGGFLPNG FTGVLMSLQM VMFAYLGIEM LGVTAGEVKN PEKSLTRAIN TVFWRILIFY VGALFVIMSI YPWNEIGEKG SPFVLTFEKI GIHAAAGIIN FVVLTAALSS CNSGIFSTSR MLFNLAEQKE APPSFAKLTK RGIPGVALIV TALAMLVGVY LNYVSEKVFQ WVTSVATFGA IWTWAIILLS QLHFRKRLSP EKQKQLKYKM PLYPYSSYIA LAFLVGVVGL MAYFPDTRIA LIIGPAWLIL LVVVYYAKGM HKRHAYPSDK KQVS
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