| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_3378 |
|---|
| Symbol | |
|---|
| ID | 7977134 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | - |
|---|
| Start bp | 3404967 |
|---|
| End bp | 3405470 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644800145 |
|---|
| Product | PTS system, glucose subfamily, IIA subunit |
|---|
| Protein accession | YP_002951284 |
|---|
| Protein GI | 239828660 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2190] Phosphotransferase system IIA components |
|---|
| TIGRFAM ID | [TIGR00830] PTS system, glucose subfamily, IIA component |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.477381 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAAAA AATGGTTCGG CAAAAAAACA AAACCAACTT ATGAAGATGT TGTTGCGCCG
TTGACAGGGG CAATCAAGCC GCTAGAAGAA GTTCCCGATC CCGTTTTTTC GCAAAAAATG
ATGGGAGACG GCATTGCGAT TGAGCCGACG GACGGAGAAG TTGTTGCGCC TGTCAATGGG
GAAGTCGTGC AAGTATTCCC GACAAAACAT GCTGTAGGCT TACGTTCAGA TGCAGGGATA
GAGCTGCTCA TTCATGTTGG CTTGGAAACA GTTTCGATGA ATGGCGAAGG ATTTACGGCG
CACGTAGCAG CCGGAGACCG TGTCAAAGCC GGACAACGTT TATTAACGTT CGATTTAGAT
CTTATCAAAC AAAAAGCGAA AAGCACGATC ACGCCAATTA TTGTAACAAA CGGCGATGTC
GTGGCAAGCT TGCAAAAAAC GCCAGAAGCA CAAGCAACAA AAGGAGAAAC GGTTATTTTC
CATATTGAAA CGAATAATGC GTAA
|
|---|
| Protein sequence | MFKKWFGKKT KPTYEDVVAP LTGAIKPLEE VPDPVFSQKM MGDGIAIEPT DGEVVAPVNG
EVVQVFPTKH AVGLRSDAGI ELLIHVGLET VSMNGEGFTA HVAAGDRVKA GQRLLTFDLD
LIKQKAKSTI TPIIVTNGDV VASLQKTPEA QATKGETVIF HIETNNA
|
|---|
| |