Gene GWCH70_3351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGWCH70_3351 
Symbol 
ID7977109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacillus sp. WCH70 
KingdomBacteria 
Replicon accessionNC_012793 
Strand
Start bp3379393 
End bp3380220 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content42% 
IMG OID644800118 
Productspermidine synthase 
Protein accessionYP_002951257 
Protein GI239828633 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0421] Spermidine synthase 
TIGRFAM ID[TIGR00417] spermidine synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000337487 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTAT GGTTTACGGA AAAGCAGACA GAGCATTTTG GCATTACAGC GAGAATTAAA 
CGAACTTTAC ATACAGAGCA AACCCCATTT CAAAAGCTGG ACATGGTGGA GACAGTAGAG
TTCGGCAATA TGCTTATTTT AGACGGAATG GTGATGACAA CGCAAAAAGA TGAGTTTGTG
TACCACGAAA TGGTTGCACA CGTTCCGCTC TTCACCCACC CGAATCCGGA AAATGTGCTT
GTCGTTGGCG GCGGCGATGG CGGTGTTATT CGTGAAGTGT TAAAACACCC GAGCGTAAAA
AAAGTGACAT TAGTGGAGAT TGATGGAAAA GTGATTGAAT GCTCAAAAAA ATTTCTTCCG
GAAATTGCTG GAAAGTTAGA TGACCCGCGT GTAGAAGTAA AAGTGGATGA CGGTTTTATG
CATATTGCGA AAAGTGAAAA CGAATATGAC GTCATTATGG TCGATTCGAC AGAGCCAGTC
GGCCCGGCTG TCAACTTATT TACAAAAGGT TTTTATGCTG GAATCGCAAA GGCTTTGAAA
GAAGACGGCA TTTTTGTCGC ACAAACAGAC AACCCTTGGT TTAAAGCAGA CTTAATCCGT
AATGTTTATC GCGATGTTCG CGAAATTTTC CCGATTACGC GTCTATACAC TGCCAATATC
CCGACATATC CAAGCGGTCT ATGGACGTTT ACGATCGGCT CGAAAAAATA CGATCCGCTT
GAAGTAAGCG ATGAACGCTT CCACGATATT GAGACGAAAT ATTACACAAA AGAGCTTCAT
AAAGCTTGCT TTGTTCTGCC GAAATTTGTC GCTGATTTAT TGAAGTAA
 
Protein sequence
MELWFTEKQT EHFGITARIK RTLHTEQTPF QKLDMVETVE FGNMLILDGM VMTTQKDEFV 
YHEMVAHVPL FTHPNPENVL VVGGGDGGVI REVLKHPSVK KVTLVEIDGK VIECSKKFLP
EIAGKLDDPR VEVKVDDGFM HIAKSENEYD VIMVDSTEPV GPAVNLFTKG FYAGIAKALK
EDGIFVAQTD NPWFKADLIR NVYRDVREIF PITRLYTANI PTYPSGLWTF TIGSKKYDPL
EVSDERFHDI ETKYYTKELH KACFVLPKFV ADLLK