| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_3205 |
|---|
| Symbol | |
|---|
| ID | 7977053 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | - |
|---|
| Start bp | 3237110 |
|---|
| End bp | 3238030 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 644799988 |
|---|
| Product | protein of unknown function DUF6 transmembrane |
|---|
| Protein accession | YP_002951127 |
|---|
| Protein GI | 239828503 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2962] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAAAT CGTTCGTTTA TATCTTCCTC GTCTTGATTA TGATGATCTG GGGATTGAAC
GTGATTGCCA TCAAGATTTT AGTCGAACAT TTTTCGCCGG TGACGTTAAC ATCGTTTCGG
ATTTTTACTG CAGGGATCGT TGTGATTCTG ATTTTGCTAT TCATGGGGCA GTTGCGGAAA
TTAACTTGGA AGGAAGTGAT GTATATTGGC ATAGCTGCTT TGTTCAGTGT CGTTGCCCAT
CACCTTTTTC TTGCGCTCGG ATTAACAAAA ACGACAGCGT CCAATGCTGG GTTGATTTTA
GGGCTTATTC CGCTGGTGAC ATCGGTGTTG GCGGCCATCT TTTTAGGCAA TCGGCTTACA
GTGTTTCGGT TTGTCGGGAT TTTCCTCGGG TTTGCCGGCG TGGCGTTTGT CGTGTTAAAC
GGTAAAAGCG GCATTCACCA TGTGTCCATT GGCGATTTTT ATGTATTCCT GGCCGTATTA
TCGCAAGCAA TTAGTTTTAT CATGATTAAA AAAGCAACGG TCGATGCCCG TGTGATGACA
GGATGGATGT TGTTGTTTGG GTCTTTGCTT TTATTTTTCA TTAGTTTGTG GATGGAACCG
AACGGCTTAT CCAGCTTGGC AGGCGGTACG CCATCCCTAT GGATGATCTT CCTTGCTTCC
GCTGTATTTG CCACTGCGCT CGGCCATATG TTTTACAACC AAGCGATTCA ACATATTGGT
GCGGTGGAAT CGGCGATTTT CATTAATTTG AATCCTTTGT TTTCTTTGCT GGGAGCTTAT
TTATTCCTCG GAGAATCTAT TTCCCATACA CAAATGATCG GATTTATTTT AATTGTACTC
GGTGTCGTCT TAGGCAGCGG TGTATTGGAT GAAATCGAGG TGTTTACTCA TCGCTCGAAA
ATGATGGGGA AAAAGTGTTG A
|
|---|
| Protein sequence | MSKSFVYIFL VLIMMIWGLN VIAIKILVEH FSPVTLTSFR IFTAGIVVIL ILLFMGQLRK
LTWKEVMYIG IAALFSVVAH HLFLALGLTK TTASNAGLIL GLIPLVTSVL AAIFLGNRLT
VFRFVGIFLG FAGVAFVVLN GKSGIHHVSI GDFYVFLAVL SQAISFIMIK KATVDARVMT
GWMLLFGSLL LFFISLWMEP NGLSSLAGGT PSLWMIFLAS AVFATALGHM FYNQAIQHIG
AVESAIFINL NPLFSLLGAY LFLGESISHT QMIGFILIVL GVVLGSGVLD EIEVFTHRSK
MMGKKC
|
|---|
| |