Gene GWCH70_3161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGWCH70_3161 
Symbol 
ID7979211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacillus sp. WCH70 
KingdomBacteria 
Replicon accessionNC_012793 
Strand
Start bp3189913 
End bp3190995 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content51% 
IMG OID644799946 
Productpyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 
Protein accessionYP_002951085 
Protein GI239828461 
COG category[C] Energy production and conversion 
COG ID[COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit 
TIGRFAM ID[TIGR03181] pyruvate dehydrogenase E1 component, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGACC AAAACCAATT GCCGTTTGAT ATGGTACAGC TGTTGGATGA AAACGGGAAC 
GGGGATGAGG AAGCATTACA ACAATTTTCC GATGAATTTC TCGTCACACT ATATAAATGG
ATGCGAAAAG CAAGAGTCGT TGATGAACGT TTGTTAAAAA TGCAGCGGCA AGGGCGGATC
GGTACATACG CGCCATTCAG CGGGCAGGAA GCGGCGCAAA TCGGCAGCGT GCTCGCGCTT
GAGAAAGAGG ACTGGATTTT TCCAAGCTAC CGGGAAATCG CTGCTTGTTT GGCGCATGGG
CTGCCTCTTA CGCAAATTTT TCATTACGTG AGAGGCCATG TGCTTGGCGG CAGAACGCCG
GAGCATTTAA ACATTTTCCC GATTCAAATC ATTATTGGCG CGCAGACGCT TCATGCGACA
GGGTGCGCAT GGGCAGCAAA ACTGAAAGGA GAAAAGCAAG TATCCGTCTG TTATTTCGGC
GATGGCGCGA CATCAGAAGG CGATTTCCAT GAAGCGATGA ACTTTGCGTC TGTTTATCAA
GTTCCGGTCA TTTTTTTCTG CCAAAACAAC CAATACGCCA TCAGCGTTCC GGTGCATAAG
CAAACGGCAA GCCGGACGAT CGCGCAAAAA GCGATCGCAT ACGGAATGAA AGGCGTGCTT
GTCGACGGCA ACGATGCGCT TGCCGTGTAC AAAACGATGA AAGAGGCGGT CGATGCGGCG
CGAAACGGCG AAGGACCGAT GCTAATTGAG GCGCTGACGT ATCGACTGGG GCCGCATACG
ACATCCGATG ACCCGACAAA ATATCGAAGC GCGGAAGAAG CGGAGCAGTG GAAAAGGAAA
AAAGATCCGC TTCATCGCTT GCGGGTGCTG TTAGAAAAAC GCGGGCTTTG GACAGAAGAA
AAAGAAGAAG CATGGGTAGC GCAAGCAAAC GACGAAGTCA CGGCGGCGTA TGAAGAAGCG
GTGGCGGCGG AGACAGGGTC GATCGTCGAT GTATTTGACT ACGTGTACGG TAAGCCAAGC
AAGCTTTTAC AGGAGCAGCA ACAAGAAGCA GCAAGGAGAA AGCAAGGGAA AGAGGTGAAA
TAA
 
Protein sequence
MFDQNQLPFD MVQLLDENGN GDEEALQQFS DEFLVTLYKW MRKARVVDER LLKMQRQGRI 
GTYAPFSGQE AAQIGSVLAL EKEDWIFPSY REIAACLAHG LPLTQIFHYV RGHVLGGRTP
EHLNIFPIQI IIGAQTLHAT GCAWAAKLKG EKQVSVCYFG DGATSEGDFH EAMNFASVYQ
VPVIFFCQNN QYAISVPVHK QTASRTIAQK AIAYGMKGVL VDGNDALAVY KTMKEAVDAA
RNGEGPMLIE ALTYRLGPHT TSDDPTKYRS AEEAEQWKRK KDPLHRLRVL LEKRGLWTEE
KEEAWVAQAN DEVTAAYEEA VAAETGSIVD VFDYVYGKPS KLLQEQQQEA ARRKQGKEVK