Gene GWCH70_3139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGWCH70_3139 
Symbol 
ID7976782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacillus sp. WCH70 
KingdomBacteria 
Replicon accessionNC_012793 
Strand
Start bp3167094 
End bp3167696 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content44% 
IMG OID644799925 
Productsortase family protein 
Protein accessionYP_002951064 
Protein GI239828440 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3764] Sortase (surface protein transpeptidase) 
TIGRFAM ID[TIGR01076] LPXTG-site transpeptidase (sortase) family protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.211754 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGGGC GGTGGAAAAC ATATCAAACG TACGGTGCGT TGGTTTGTAT AATGATAGGA 
TTGGTGTTGG CACTTTGGAA TGGATATTCC TATTGGCTCG GGTACGATGC TGTAAAACCG
TTGGAAGAGA AAGGAAAAAC GCCTATTGCT CGGCAAATGA CTATAAATAC GGCCGCCAAA
CCGGAGATTG GCGAGCAAAT CGGGATGTTA TCGATTCCAA AGCTTGGCGT TTCTATACCA
ATTTATCATG GAACAGAAGA GCGGCAATTG CGAAAAGGAA TTGGGCATTA TCCAAAAAGC
GCTTTGCCGG GAGAACGAGA TAAGAATAAT ATGGTGCTAT CCGGTCATCG TGATACTGTA
TTTCGGCAAT TGGGCCAAAT CGGTGTTGGC GACAAATTAA TTGTGGAAAC AACAATGAAG
CAGTTTATTT ATCGAGTAAA AAAAGTCCGC ATCGTGGATG AAAACAACCG TACGGTTCTC
GTCGAAAAGC CTCGTCCAAC ATTAACGGTG ACGACATGCT ATCCGTTCCA TTTTATTGGC
AAAGCGAAGC AGCGCTATGT TCTCATTGCG CAGCTTGTTT CCACCATAAA GAAAAAGGGC
TAG
 
Protein sequence
MSGRWKTYQT YGALVCIMIG LVLALWNGYS YWLGYDAVKP LEEKGKTPIA RQMTINTAAK 
PEIGEQIGML SIPKLGVSIP IYHGTEERQL RKGIGHYPKS ALPGERDKNN MVLSGHRDTV
FRQLGQIGVG DKLIVETTMK QFIYRVKKVR IVDENNRTVL VEKPRPTLTV TTCYPFHFIG
KAKQRYVLIA QLVSTIKKKG