Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GWCH70_3139 |
Symbol | |
ID | 7976782 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacillus sp. WCH70 |
Kingdom | Bacteria |
Replicon accession | NC_012793 |
Strand | - |
Start bp | 3167094 |
End bp | 3167696 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644799925 |
Product | sortase family protein |
Protein accession | YP_002951064 |
Protein GI | 239828440 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3764] Sortase (surface protein transpeptidase) |
TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.211754 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGGGC GGTGGAAAAC ATATCAAACG TACGGTGCGT TGGTTTGTAT AATGATAGGA TTGGTGTTGG CACTTTGGAA TGGATATTCC TATTGGCTCG GGTACGATGC TGTAAAACCG TTGGAAGAGA AAGGAAAAAC GCCTATTGCT CGGCAAATGA CTATAAATAC GGCCGCCAAA CCGGAGATTG GCGAGCAAAT CGGGATGTTA TCGATTCCAA AGCTTGGCGT TTCTATACCA ATTTATCATG GAACAGAAGA GCGGCAATTG CGAAAAGGAA TTGGGCATTA TCCAAAAAGC GCTTTGCCGG GAGAACGAGA TAAGAATAAT ATGGTGCTAT CCGGTCATCG TGATACTGTA TTTCGGCAAT TGGGCCAAAT CGGTGTTGGC GACAAATTAA TTGTGGAAAC AACAATGAAG CAGTTTATTT ATCGAGTAAA AAAAGTCCGC ATCGTGGATG AAAACAACCG TACGGTTCTC GTCGAAAAGC CTCGTCCAAC ATTAACGGTG ACGACATGCT ATCCGTTCCA TTTTATTGGC AAAGCGAAGC AGCGCTATGT TCTCATTGCG CAGCTTGTTT CCACCATAAA GAAAAAGGGC TAG
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Protein sequence | MSGRWKTYQT YGALVCIMIG LVLALWNGYS YWLGYDAVKP LEEKGKTPIA RQMTINTAAK PEIGEQIGML SIPKLGVSIP IYHGTEERQL RKGIGHYPKS ALPGERDKNN MVLSGHRDTV FRQLGQIGVG DKLIVETTMK QFIYRVKKVR IVDENNRTVL VEKPRPTLTV TTCYPFHFIG KAKQRYVLIA QLVSTIKKKG
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