Gene GWCH70_3121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGWCH70_3121 
Symbol 
ID7976766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacillus sp. WCH70 
KingdomBacteria 
Replicon accessionNC_012793 
Strand
Start bp3144350 
End bp3145351 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content43% 
IMG OID644799907 
ProductNLP/P60 protein 
Protein accessionYP_002951046 
Protein GI239828422 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGTGA AAAAAGTGAT TTCTTTTTTG CTGATTTTTA CCTTCCTCAT TAGCGGCCTT 
CCAAGAGCTT ATGCGGAAAA CCGCGATGAA GTCGTAAAAA TCGCAAAAGA ACAGCTTGGC
GCTCCTTATC GATTCGGCGG TGTTACTCCA AGCGGATTTG ATTGTTCCGG GTTTGTTCAA
TATGTATTTG ATAAAGTCGG AGTTGCGCTG CCGAGAACAG CAAGTGAACA ATATCAAACC
GGAGTGGCCG TCAACAAGGA AGATTTGCTG CCTGGTGATT TAGTATTTTT TAAGGATACA
TATAAATCCG GAATTTCTCA TTCAGGCATA TACATAGGAA ATGACGAATT CATTAGTGCA
ACAACGAGCC GAGGCGTTGC CGTTGCATCC ATGGGCAACC CGTATTGGGA ACCAAAGTTT
GCTGGCGGTA AACGAATCAT TGAAGAGACA CTTCCACCTG GGCAATTTTA TGATGTCAAT
GCGGATCATC CGGCATATAA AGCGATCAGT GAGCTAAGCA AAGCAGGAAT TATTAATGGA
TTTGAAGGCT CTTATTTCAA GCCGGATCTT CCCGTTACAA GAGGACAAGC AGCTGCGATA
TTAAATCGCT ATTTAAAACT GCCTGCCTCT TCAACAACAC CGTTCTCAGA TGTGTCGTTA
GGGATGTCAT TCGCAAAAGA TATTGCTGCC ATGAAAGAAG CTGGCATTAT TACTGGATAT
AACGATGGTA CGTTCCGCCC TTATGAAAAT ATTACAAGAG CGCAAATGGC TGTCATTATC
GACCGTGCGT TTCAACTTAG TAAAAGCCCC GCCATTGCTG GTACTACAGC CAAATATAAT
GATGTAAATC CAGGCTTTTG GGCATATCCA TCGATTATTG CGATCAAAGC GACGGATTGC
ACGGGGGTAT TTAACAGTTC CAGCTTTAAC GGCAACACTT ACGCAACAAG AATGGATTTT
GCATCGGCGG TTTACAGCGC AATTCAGGCA TCTCCAAAAT AA
 
Protein sequence
MMVKKVISFL LIFTFLISGL PRAYAENRDE VVKIAKEQLG APYRFGGVTP SGFDCSGFVQ 
YVFDKVGVAL PRTASEQYQT GVAVNKEDLL PGDLVFFKDT YKSGISHSGI YIGNDEFISA
TTSRGVAVAS MGNPYWEPKF AGGKRIIEET LPPGQFYDVN ADHPAYKAIS ELSKAGIING
FEGSYFKPDL PVTRGQAAAI LNRYLKLPAS STTPFSDVSL GMSFAKDIAA MKEAGIITGY
NDGTFRPYEN ITRAQMAVII DRAFQLSKSP AIAGTTAKYN DVNPGFWAYP SIIAIKATDC
TGVFNSSSFN GNTYATRMDF ASAVYSAIQA SPK