Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GWCH70_3108 |
Symbol | |
ID | 7976753 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacillus sp. WCH70 |
Kingdom | Bacteria |
Replicon accession | NC_012793 |
Strand | - |
Start bp | 3127617 |
End bp | 3128495 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644799894 |
Product | integrase family protein |
Protein accession | YP_002951033 |
Protein GI | 239828409 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000000512092 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCAGGAAT TACTCGATGC GTTTAAGCAA TGGCTCACAG AGGAAGGAAA GGCACCAAAA ACGATTGAGT CTTACGTGGG AGACATCAAA AGCTACCAGC GATTTTTGGG TGAGAAGGCT GTGTCAGACC AGCAGCCTCT CTCTCGCTTT TCCTTTGTGA GATACAAGCA ACATTTACTA GACGAAGGAT TTGCCGTTGC GACCATCAAC AAGAAAATCA ATAGCCTAAA GGTGTACAAC GACTTCTTGC AAAAGAAAGG AATTGTCAGT GAAAGTTACA TTCAACTAAA ACGTGACCGG GTACAGATTG CGGCAGGAAG TGAACACGTT GTCACTGCCT TGTCAGAGGA AGAAGTAGAG AAACTGCTGT TTTACCTAGA GGATCGCACC AAAGTCAGTC TCCGAAATAA GCTTATTGCC TACTTGCTTT TGTACACTGG TGTTCGAGTG TCGGAACTCG TCAATATCAA ACTTACAGAC ATAGATGTTC TTACCGCTAC TTTGATGATT CGCGGAAAAG GTGGAAAAGT TCGAGAAATA AGCTTACGTC AGGATTTAGT TCAGCTAATA AAAGAGTATC AGATTGGAGA AAGGCAAGAA TCCCGCTTTC GTGAAAGTGA ATATCTTCTC GTTAGCCAGC GAAGCAAGAA GATGCACCGG GACGCTGTTC GAAATTGGTT AGCGAACATC TCAAAAGATA TCGGAATCAA GCTCCATCCG CACTTGTTTC GTCACACGTT TGCAACCAGG CTGCTTCGAA AAGGAGTAGA CTTAACCACT GTTAGCAAAC TAACAGGGCA TTCAACGGTC AACATGACGG CTAAATTCTA CATTCAAACC ACAAGAGAAG AAAAGAAAGC AGCTGTAGAG CTGTTGTAA
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Protein sequence | MQELLDAFKQ WLTEEGKAPK TIESYVGDIK SYQRFLGEKA VSDQQPLSRF SFVRYKQHLL DEGFAVATIN KKINSLKVYN DFLQKKGIVS ESYIQLKRDR VQIAAGSEHV VTALSEEEVE KLLFYLEDRT KVSLRNKLIA YLLLYTGVRV SELVNIKLTD IDVLTATLMI RGKGGKVREI SLRQDLVQLI KEYQIGERQE SRFRESEYLL VSQRSKKMHR DAVRNWLANI SKDIGIKLHP HLFRHTFATR LLRKGVDLTT VSKLTGHSTV NMTAKFYIQT TREEKKAAVE LL
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