| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_2965 |
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| Symbol | |
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| ID | 7977264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacillus sp. WCH70 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012793 |
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| Strand | - |
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| Start bp | 2987425 |
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| End bp | 2988738 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644799764 |
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| Product | RNA polymerase factor sigma-54 |
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| Protein accession | YP_002950904 |
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| Protein GI | 239828280 |
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| COG category | [K] Transcription |
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| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
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| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000225777 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGGCCG AATTATTGCA GGAGCAGCGA CTGAAGCTAT CGCTTACAAA GGAATTGACT
CAAGCGATTG AACTATTGCA ATATTCTGCT GTGGAATTAC AGTCCTTTTT GTATGAGCAG
TCGTTGGAAA ATCCTTTTCT CGAAATTCGC GACTACCGGT TAAAGCGAAA CTTCCGCAAC
TTATCGGATA AGGAAAAACA GCAGTGGATT GAAAATATGA GCACTTATTC GGAAACGCTT
TCATCATATT TAACTGCACA GCTTCCAGCT CTTTCGCTTT CGGAACACGA AGAACGCATC
GTGCATTATA TGATTGCTTG CCTTGATGAA GATGGGTATT TGCGGGTAAA TATCGAAGAA
ATTGCAGAAC GATTTGCTAT TTCCAAACAG GAAGCAGAAA AGGCGCTTCA GATCATTCAG
TCATTAGAGC CGGCTGGCGT TGGCGCCCGC AACTTGCAAG AATGTTTATA TTTACAGTTA
AAGCGCTTAC CATATCGCGA TGAATTCGCG GAACAGATTA TACAGCACCA TTTTTCGTTA
TTTGTCGAAA AAGCTTGGAA AACGTTGGCG AAACAACTTG GCGTGGATAT CGCTTCATTG
CAGCGTGTAT GGGATTTAAT TCGCACGCTT GAACCGCGTC CTGGCATCCA TTATACAAAA
GAGAGACCGC ATTTTATTGT TCCCGATATA ATTGTCCAAC GCAGCGAAGA AGGTGATTGG
CGCATTTTTT ACAATGAAGA TGTGCATCCG GAACTCATCT GGAATCGGGG ATACGAGCAA
AAGATTTCCA GCTGTCAAGA CGGGCAGGTT CACGCGTTTG TAAAAGATAA ATATCGCCAG
TTTTTATGGT TAGCAAAAAG TCTGGAACAG CGCAAACAAA CATTGCTGAA CATTATGCAT
GTCATTGTCG ATAAACAAAA ACAATGTTTT GAAACTGGTT TTGCAGCCTT AAAGCCCCTT
ACAATGCGCG AAGTTGCGGA AGAGCTTGGC ATTCACGAAT CTACTGTCAG CCGCGCGGTA
AAAAACAAAT ATGTTCAAGC GCCGTTTGGC ACAGTGGAAC TTCGCCGCTT TTTTTCAAGC
GCTGTTTCTT CTGTTTACAT GGATGAAGAT GCTGCCTCTT CTGTAAAAGT AAAAATGTTT
ATCAGGCAGT TAATTGAACA GGAAAATAAG CAGGAGCCGC TTTCTGACCA AAAGCTCGCC
GATTTATTAC ATGAGCAATA CGGTGTGGTG ATCTCGCGCA GAACGGTCGC AAAATATCGC
GAACAACTGC ATATTCCATC ATCTGCAAAA CGAAAACAGT ATGTAGGGAA GTGA
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| Protein sequence | MRAELLQEQR LKLSLTKELT QAIELLQYSA VELQSFLYEQ SLENPFLEIR DYRLKRNFRN
LSDKEKQQWI ENMSTYSETL SSYLTAQLPA LSLSEHEERI VHYMIACLDE DGYLRVNIEE
IAERFAISKQ EAEKALQIIQ SLEPAGVGAR NLQECLYLQL KRLPYRDEFA EQIIQHHFSL
FVEKAWKTLA KQLGVDIASL QRVWDLIRTL EPRPGIHYTK ERPHFIVPDI IVQRSEEGDW
RIFYNEDVHP ELIWNRGYEQ KISSCQDGQV HAFVKDKYRQ FLWLAKSLEQ RKQTLLNIMH
VIVDKQKQCF ETGFAALKPL TMREVAEELG IHESTVSRAV KNKYVQAPFG TVELRRFFSS
AVSSVYMDED AASSVKVKMF IRQLIEQENK QEPLSDQKLA DLLHEQYGVV ISRRTVAKYR
EQLHIPSSAK RKQYVGK
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