| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_2955 |
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| Symbol | |
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| ID | 7977254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacillus sp. WCH70 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012793 |
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| Strand | - |
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| Start bp | 2976467 |
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| End bp | 2978755 |
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| Gene Length | 2289 bp |
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| Protein Length | 762 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644799754 |
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| Product | ribonuclease R |
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| Protein accession | YP_002950894 |
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| Protein GI | 239828270 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02063] ribonuclease R |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000417995 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCAAT CATTAGTCGA TCGAATTTTA ACGTTTATGC GGGACGAGGC GTACAAGCCT
CTTACCGTTC AAGAGTTGGA AGAAGCGTTC GGCATTACGG ATGCGGCCGA GTTTAAGGAA
TTTGTGAAGG CGCTTGTCGC TATGGAAGAA CAAGGGCTTG TTGTGCGTAC GAGAAGCAAT
CGCTACGGTG TGCCGGAAAA AATGAACTTA GTGCGCGGAA AAGTGTCCGG ACACGCAAAA
GGGTTTGCTT TCGTTGTGCC GGAAGATCCG TCGCTCGACG ATATTTTCAT CCCGCCTTCC
GAGATGAAAA ACGCGATGCA TGGCGATACC GTATTAGTGC GTGTGCATTC CGAATCGTCA
GGCGCCCGCA GGGAAGGAAC GATTGTACGG ATTTTAGAAC GCGGTGTCAC CGAAGTTGTC
GGAACTTATA CGGAAAGCAA GTATTTCGGA TTTGTCATTC CGGATGATAA AAAAATTGTC
AATGACATTT TTATTCCGAA ACATGCCGCT AACGGTGCTG TGGAAGGACA TAAAGTGGTC
GTGCGGTTGA CATCGTACCC GCAAGGACGA ATGAGCGCCG AAGGAGAAGT TATTAAAATT
CTCGGACATA AAAACGACCC AGGTGTTGAT ATTTTAGCGA TTATTCATAA ACACGGCCTT
CCTTTGCAAT TTCCAGATGA AGTCATCGAA CACGCCAACA GCATTTCCGA TACGATTTCG
GAAAAAGATT TGCAAGGCCG CCGCGATTTG CGCGATCAAA TGATTGTCAC GATCGACGGA
GAAGACGCGA AAGACTTAGA CGACGCTGTA ACGGTCACTA AGCTTGAGAA CGGGAATTAC
AAGCTTGGCG TCCACATTGC CGATGTCAGC TATTATGTGG AAGAAGGCTC GCCAATTGAC
CGCGAAGCGT ACGAACGAGG GACAAGCGTT TATTTGGTGG ATCGCGTCAT TCCGATGATT
CCGCATCGTT TATCGAACGG CATTTGCTCC TTAAATCCGA AAGTCGATCG CTTAACACTT
TCATGTGAAA TGGAAATTAA CGAACGCGGC GAAGTCGTCA GCCATGAAAT TTTTCAAAGC
GTCATTCGTA CGACAGAGCG GATGACGTAT TCGGATGTGA ACAAAATTCT CGTTGATAAA
GACGAGGAAC TAAGAAAAAA ATACGAACCG CTTGTGCCGA TGTTTGAATT GATGGCAGAG
CTTGCGGAAA TTTTGCGCAA TAAACGGATG AAGCGCGGTG CAATTGATTT CGACTTTAAA
GAAGCAAAAG TGCTTGTGGA TGAGAATGGA AAACCTTATG ATGTCGTGCT TCGTGAACGA
TCGGTGGCGG AGCGGCTTAT TGAAGAATTT ATGCTGGTGG CGAACGAAAC GGTCGCTGAA
CATTTTCATT GGTTAAACGT TCCGTTTATT TATCGTGTTC ACGAAGATCC AAAACCAGAA
AAGCTGCAGC GTTTTCTCGA ATTTATTACA AACTTTGGCT ACGTCGTCAA AGGGACAGGA
AACCAAATTC ATCCGCGCGC GCTCCAGGAA ATTTTAGAAG CGGTTCGCGG CGAGCCGGAA
GAAATGGTCA TATCGACGGT GATGCTTCGC TCGATGAAGC AGGCGCGCTA TGACGCGGAA
AGTCTCGGTC ACTACGGATT ATCGACCGAT TTTTATACGC ATTTTACATC TCCGATCCGC
CGTTATCCAG ACTTAATTGT GCACCGTCTC ATTCGTACGT ACTTAATTAA TGGGCAAATG
GATGAACAAA CCCAACGAAA ATGGGCCGAA AAGCTTCCAG ACATCGCTGA ACACGCATCC
GATATGGAGC GCCGCGCTGT GGAAGCCGAG CGGGAAACGG ATGATTTGAA GAAAACAGAG
TTTATGGAAG ATAAAATCGG CATGGAGTTT GACGGAATTA TTAGCTCGGT TACGAACTTC
GGCCTTTTTG TCGAACTGCC GAACACGATC GAAGGGCTTG TTCATGTCAG CTACTTAACG
GACGACTATT ATCGCTATGA TGAACGGCAT TACGCCATGA TCGGTGAGCG AACCGGAAAA
GTGTACCGCA TCGGCGATGA GATTACCGTG CGTGTCATTA ACGTGAACAA AGATGAGCGG
ATCGTCGACT TTGAAATTGT CGGCATGAAA GGCCGCCGTC CTAAAGAGGC AAAAAGTGCA
CCTGTCGTTA TTGAAGGGAA AAAGCGGAAA AAAACAAATA AACAAAATGG AAAAGCGAAA
AAATCAAAGA AATTTTACGA AGACGTTCCA CAGCTAAAAG CAAAAAAGAA GAAAAAGAAA
AAACGATAA
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| Protein sequence | MDQSLVDRIL TFMRDEAYKP LTVQELEEAF GITDAAEFKE FVKALVAMEE QGLVVRTRSN
RYGVPEKMNL VRGKVSGHAK GFAFVVPEDP SLDDIFIPPS EMKNAMHGDT VLVRVHSESS
GARREGTIVR ILERGVTEVV GTYTESKYFG FVIPDDKKIV NDIFIPKHAA NGAVEGHKVV
VRLTSYPQGR MSAEGEVIKI LGHKNDPGVD ILAIIHKHGL PLQFPDEVIE HANSISDTIS
EKDLQGRRDL RDQMIVTIDG EDAKDLDDAV TVTKLENGNY KLGVHIADVS YYVEEGSPID
REAYERGTSV YLVDRVIPMI PHRLSNGICS LNPKVDRLTL SCEMEINERG EVVSHEIFQS
VIRTTERMTY SDVNKILVDK DEELRKKYEP LVPMFELMAE LAEILRNKRM KRGAIDFDFK
EAKVLVDENG KPYDVVLRER SVAERLIEEF MLVANETVAE HFHWLNVPFI YRVHEDPKPE
KLQRFLEFIT NFGYVVKGTG NQIHPRALQE ILEAVRGEPE EMVISTVMLR SMKQARYDAE
SLGHYGLSTD FYTHFTSPIR RYPDLIVHRL IRTYLINGQM DEQTQRKWAE KLPDIAEHAS
DMERRAVEAE RETDDLKKTE FMEDKIGMEF DGIISSVTNF GLFVELPNTI EGLVHVSYLT
DDYYRYDERH YAMIGERTGK VYRIGDEITV RVINVNKDER IVDFEIVGMK GRRPKEAKSA
PVVIEGKKRK KTNKQNGKAK KSKKFYEDVP QLKAKKKKKK KR
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