| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_2513 |
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| Symbol | |
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| ID | 7979506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacillus sp. WCH70 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012793 |
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| Strand | - |
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| Start bp | 2543211 |
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| End bp | 2545463 |
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| Gene Length | 2253 bp |
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| Protein Length | 750 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644799314 |
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| Product | bifunctional preprotein translocase subunit SecD/SecF |
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| Protein accession | YP_002950474 |
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| Protein GI | 239827850 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0342] Preprotein translocase subunit SecD |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF
[TIGR01129] protein-export membrane protein SecD |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000183584 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAAAAC GCAGTCGCAT TGTCGCGTTT TTCCTGTTGC TTTTGCTTTT TGCAGGAGTG
ATGGGGCCGA CGATTCAAGG AATTTTACAT AACATTAAAT TAGGTCTTGA TTTGCAAGGC
GGCTTTGAAG TGCTGTATGA AGTAAAGCCA GCGAAAAAAG GCGATAAAAT TGACAAAGAA
ACATTAAAAA GCACGGTGAG CGCGCTAAAC AAACGGATTA ACGTGCTCGG TGTGAGCGAG
CCAAACATTC AAATAGAAGG AAAAAATCGG ATTCGCGTGC AGCTTGCGGG GATAAAAGAT
CAAAATCAAG CGCGCGAGAT TTTATCGACG CAGGCAAAAT TAACGTTCCG CGATGTGCAT
GATAACGTGT TAATGGATGG AAGCGATCTT GTTCAAGGCG GAGCAAAGCT GTCCTTTGAC
GAAAACGGGA AACCGAGTGT TGCCATTAAA TTAAAAGATG CGGATAAATT TAAACAAGTG
ACAGAAAAAG TATATAAAAT GGGACCGCCA AATAACTTAT TGGTCATTTG GCTGGACTTT
AAAGAAGGAG AAGATTCCTA CGCGAAAGAA GCGGGAAAAG CAGATCCAAA ATTTATTTCC
GCGGCAGCGG TAAACCAAGT ATTTGCCCAA ACAGATGTCT CCATCGTAGG CAATTTCACC
GTTAAGGAGG CACAGCAATT AGCTGACCTG CTTAATGCTG GCGCGCTTCC AGTCGAGTTA
AAAGAAATTT ACTCGACATC GGTCGGGGCG CAGTTTGGCC AAAATGCCCT GCAAAAAACA
ATTTTTGCCG GCATTGTAGG GGTTGCCGCG ATTTTCCTCT TTATGATTTT GTTTTATCGT
TTGCCAGGGG TTATCGCTGT CATTACATTA ACTGTTTATA TTTACCTTAT TTTGCTTATC
TTTGATTGGA TGAACGGCGT ATTGACATTG CCGGGAATTG CTGCCCTTGT TTTAGGTGTC
GGGATGGCGG TTGATGCCAA TATTATTACG TATGAGCGGA TTAAAGAGGA AATTAAGCTA
GGCAAGTCGG TTATGTCGGC ATTCCGTTCT GGGAATAGAG GATCGTTGGC GACAATTGTG
GATGCGAACA TTACGACGAT GATTGCCGGT ATTGTTCTCT TTATTTACGG GACAAGCTCA
GTAAAAGGGT TCGCAACGAT GCTGATCATC AGCATTTTAG CAAGCTTCAT CACCGCGGTG
TACGGCACGC GCCTGTTGCT TGGCCTGCTT GTCCATAGCC GCTGGCTGAA CAATAAGCCA
GGCTATTTCG GTGTAAAAAA ATCGGAAATC TTAAATATCG CCGAAACAAC GGATCATACG
GAAGTACCGA CAAAATTTGA TCGTTTGGAC TTCGTAAAAC ATAGTAAAAA GTTTTTCATT
TTTTCTGGTT TGCTAACGGT GATCGGGATT ATTGCCTTAT TAACGCTGAA GCTTAATCTT
GGCATCGATT TTACGAGCGG CACGCGCATA GAAGTAATGA GTGATAAACC AATTAATGTT
CAGCAGTTAA AAGAAGAGTT TCAAAAGCTT GACTTAAAAC CGGAGGACAT CGTATTATCA
GGCGAGCATA ATAATATCGG TGTTGCTCGT TTGATCGGCG TGTTAAGCAA AAAAGAAATT
GCGGAGCTAA AAGCACATTT TAAACAGCAA TATGGTTCAG AGCCGAACGT CAGCACGGTA
TCTCCGGTTA TTGGAAAAGA ATTGGCGCGT AACGCATTGA TCGCTGTGCT CATTTCGTCC
ATTGGGATTA TTATTTATGT GACGATTCGT TTTGAAATAT ATATGGCGCT TGCCGCGATC
GTGGCGCTTC TTCACGATGC GTTTGTCATC GTCACCTTTT TCAGCTTGAC TCGTTTAGAA
GTTGACTTAA CGTTTATTGC TGCGGTGTTA ACGATTATCG GTTATTCGAT TAACGATACG
ATCGTTACTT TTGACCGCAT CCGTGATTTA CTGAAAAAAC GCAAAGTGAA AACGGTGGAT
GATTTAAAAC ATATCGTCAA CAGAGCATTG CAACAAACGC TTACTCGTTC CATTAACACG
GTGTTAACGG TCATCTTTAC CGTTGTTGCT CTCTTGATCT TCGGCAGTGA AGCGATTCTC
AACTTTAATA TCGCCCTTTT CGTTGGTTTA ATATGCGGGG TTTACTCTTC TTTATTCATC
GCCGCGCAAT TATGGATTGT TTGGAAAGGC AACCAATTGA AAAAAGGAAA GACGAAAAAA
CGTTCAGAAA AAGAATTGGA ACCACAAGTA TAA
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| Protein sequence | MVKRSRIVAF FLLLLLFAGV MGPTIQGILH NIKLGLDLQG GFEVLYEVKP AKKGDKIDKE
TLKSTVSALN KRINVLGVSE PNIQIEGKNR IRVQLAGIKD QNQAREILST QAKLTFRDVH
DNVLMDGSDL VQGGAKLSFD ENGKPSVAIK LKDADKFKQV TEKVYKMGPP NNLLVIWLDF
KEGEDSYAKE AGKADPKFIS AAAVNQVFAQ TDVSIVGNFT VKEAQQLADL LNAGALPVEL
KEIYSTSVGA QFGQNALQKT IFAGIVGVAA IFLFMILFYR LPGVIAVITL TVYIYLILLI
FDWMNGVLTL PGIAALVLGV GMAVDANIIT YERIKEEIKL GKSVMSAFRS GNRGSLATIV
DANITTMIAG IVLFIYGTSS VKGFATMLII SILASFITAV YGTRLLLGLL VHSRWLNNKP
GYFGVKKSEI LNIAETTDHT EVPTKFDRLD FVKHSKKFFI FSGLLTVIGI IALLTLKLNL
GIDFTSGTRI EVMSDKPINV QQLKEEFQKL DLKPEDIVLS GEHNNIGVAR LIGVLSKKEI
AELKAHFKQQ YGSEPNVSTV SPVIGKELAR NALIAVLISS IGIIIYVTIR FEIYMALAAI
VALLHDAFVI VTFFSLTRLE VDLTFIAAVL TIIGYSINDT IVTFDRIRDL LKKRKVKTVD
DLKHIVNRAL QQTLTRSINT VLTVIFTVVA LLIFGSEAIL NFNIALFVGL ICGVYSSLFI
AAQLWIVWKG NQLKKGKTKK RSEKELEPQV
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