| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_2239 |
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| Symbol | |
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| ID | 7978406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacillus sp. WCH70 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012793 |
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| Strand | - |
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| Start bp | 2292233 |
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| End bp | 2293318 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644799053 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_002950213 |
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| Protein GI | 239827589 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.925938 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAAACG ATGAACAGTA TATGCGCCTA GCAATCGAAA TCGCCAAAGC AGGAATTGGA
CAAACGTCTC CTAATCCGGT TGTCGGCGCT GTTGTGGTGA AAGATGGAGA AATTGTCGGA
TTTGGCGCCC ATTTGAAAGC AGGGGAGCTG CACGCGGAGG TACATGCCAT CCGTATGGCG
GGAGAAAAAG CGAAAGGATC TACCGTTTAT GTAACGCTGG AGCCGTGCAG TCATTATGGG
AAAACGCCCC CTTGCGCCGA TTTATTAGTG GAAACAGGTG TTCAACGCGT TGTCATTGCA
ACGACAGATC CGAACCCGCT CGTAGCCGGT AAAGGCATCG AAAAACTAAG GAGTGCGGGA
ATTGACGTGA AGCTTGGGGT GCTGAAAGAG GAAGCGGATG AGTTAAACCG CGTGTTTTTC
CACTACATTG CGGCGAAAAC GCCGTTTGTG ACGCTAAAAT ATGCAAGCAG TCTTGATGGA
AAAATTGCAA CGACAACCGG AGAAAGCAAA TGGATTACAT CCGAAGCGGC CCGGGAAGAT
GTGCATCGCT ATCGGGCGGT GCATGATGCG ATTCTTGTTG GGGTAAACAC CGTTATTGCG
GATAATCCAA GTTTAACCGT AAGGCTTCCC GAAGGTGGAA AAAATCCGAT ACGCATCGTT
TTAGATACGC ATTTGCGCAC GCCGCTTGAT GCAAACATTC TCAATGATGG CCAAGCGGAA
ACGTGGATTG TTGTCGGCAG TGAAATCAGC GTTGAAAAAA GGAAGCGGTA TGAGAAAGAA
AATGTACAAA TTATTTCCAT GAAAAAGCCG CATATTGATA TAGATGAATT GCTGCGCGTA
CTTGGTGAGA AACGAATTAC TTCCCTTTTT GTTGAAGGCG GATCACACGT GCATGATAGT
TTCGTGCGCG CCAAGGCAGT TAATGAAATC GTCGCATACT TTGCTCCGAA GATCATTGGC
GGAAAACAAG CGCCAACGCC AATAGGGGGA ATTGGTTTTG CCGGCATGGC TGACGTTATG
CAGCTAGAAA TTCGGCGAGT AGAGACGATC GGGCCAGATA TAAAAATCGT CGCAATACCA
AAATAA
|
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| Protein sequence | MRNDEQYMRL AIEIAKAGIG QTSPNPVVGA VVVKDGEIVG FGAHLKAGEL HAEVHAIRMA
GEKAKGSTVY VTLEPCSHYG KTPPCADLLV ETGVQRVVIA TTDPNPLVAG KGIEKLRSAG
IDVKLGVLKE EADELNRVFF HYIAAKTPFV TLKYASSLDG KIATTTGESK WITSEAARED
VHRYRAVHDA ILVGVNTVIA DNPSLTVRLP EGGKNPIRIV LDTHLRTPLD ANILNDGQAE
TWIVVGSEIS VEKRKRYEKE NVQIISMKKP HIDIDELLRV LGEKRITSLF VEGGSHVHDS
FVRAKAVNEI VAYFAPKIIG GKQAPTPIGG IGFAGMADVM QLEIRRVETI GPDIKIVAIP
K
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