Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GWCH70_1952 |
Symbol | |
ID | 7978775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacillus sp. WCH70 |
Kingdom | Bacteria |
Replicon accession | NC_012793 |
Strand | + |
Start bp | 2010780 |
End bp | 2012177 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644798780 |
Product | transcriptional regulator, GntR family with aminotransferase domain |
Protein accession | YP_002949950 |
Protein GI | 239827326 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00720437 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAATTGC AGCCCATTCT CGATCCAACA AACGGCACAC CGCTTTACAT GCAGCTGTAT ACGTACATAA ATGAGGAAAT CACAAACGGC CATCTCCAAA AAGGAAGCAA GCTCCCATCG ATTCGCGTGC TTTCCCAACA CCTAGGCATC AGCAAAAATA CCGTCGAAAC CGCCTACCAG CAGCTTCTTG CCGAAGGATA TATTGAAAGC AAACCTCGCG TAGGATTTAT GGTGCAAGAA CTAGAAGAAC CTCTCGCACC GCAGGTTTCC CAAATCGATG TTCTGCCGGA GGCTCCGAAA AGCACGCCAA TTCGCTACAA TTTTCGCTAC GGTCATATTG ACCTTGACCA TTTTCCGATG AAAACATGGC GAAAATGTCT TCTCGCGGCG ATCGATGCGG AGCGAAGCGA ATTATTATGG TATGGCGACC GCCAAGGAGA TATCGGCTTG CGCAAAGAAA TCCAACGCTA CTTGTATCAC GCGCGCGGCA TTCGCTGTTC GGCCGAACAA ATTATTATCG GCTCTGGCAC GCCGCAACTG ATTGGCGTCT TATGCCAGCT GTTTGACCTT CGGCACGATG CGGTCGCTTT AGAAAACCCT TGTTATAATG TCATTCGCAC CATGTTTCAA AACCACCATT TTTCCATTAT CCCGATCGAT CTGGAAGAAG ATGGTCTGAA TATCGACCAG CTGCAAACAA CCAACGCGAA AGTCGTTTAT GTCACTCCTT CGCATCAATT GCCGCTTGGG ATGGTGCTGC CGATCGGCAA GCGGCAAAAG CTCCTGAAAT GGGCGCAGCA AGCAAACGGA TTTATTATCG AAGACGATTA TGACAGCGAA TTCCGCTACG GGAGTAAACC GATCCCTGCG TTAAAAGCGC TCGATACAGA AGACCGCGTC GTTTATATCG GCACGTTTTC AAAAGTGTTC ACCCCTGCCA TCCGCACGAG TTATATGGTG CTGCCGCAAC ATTTGCTAGA GCGGTTTCAT GAACGCTGCT CCAATTACCA TCAGACCGTC GCTACGGTCG TCCAAAAAGC GCTCGCCCAC TTTATGCGTG AAGGCCATTT TGAACGCCAT GTCCGCCGCA TGCGCACCAT CTACGCAAAA AAGCGGCAGA CGCTTATCGA AGCGATTCGC GAATACTTCG GTGATCAAGC AACGATCATC ATCGGCGACA AAGCGGGGCT TCATCTTCTT GTAAAAATAA AAGGCAAGGA CACCATCGAA CTTGTGCAAA AAGCAGAACA AGCGGGCATT CTCGTCTATT CCGCAGCGAA ATATTGGTTT GGGAACAACG GAACGCCGCC TTCTTATATT TTGCTGGGGT TTGGCGGCAT GAGCGAGAAA GAAATTCGCG CAGGAGTTCG CGCGTTAAAA GAAGCATGGG GGATATAG
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Protein sequence | MELQPILDPT NGTPLYMQLY TYINEEITNG HLQKGSKLPS IRVLSQHLGI SKNTVETAYQ QLLAEGYIES KPRVGFMVQE LEEPLAPQVS QIDVLPEAPK STPIRYNFRY GHIDLDHFPM KTWRKCLLAA IDAERSELLW YGDRQGDIGL RKEIQRYLYH ARGIRCSAEQ IIIGSGTPQL IGVLCQLFDL RHDAVALENP CYNVIRTMFQ NHHFSIIPID LEEDGLNIDQ LQTTNAKVVY VTPSHQLPLG MVLPIGKRQK LLKWAQQANG FIIEDDYDSE FRYGSKPIPA LKALDTEDRV VYIGTFSKVF TPAIRTSYMV LPQHLLERFH ERCSNYHQTV ATVVQKALAH FMREGHFERH VRRMRTIYAK KRQTLIEAIR EYFGDQATII IGDKAGLHLL VKIKGKDTIE LVQKAEQAGI LVYSAAKYWF GNNGTPPSYI LLGFGGMSEK EIRAGVRALK EAWGI
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