Gene GWCH70_1948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGWCH70_1948 
Symbol 
ID7978772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacillus sp. WCH70 
KingdomBacteria 
Replicon accessionNC_012793 
Strand
Start bp2007435 
End bp2008190 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content53% 
IMG OID644798776 
ProductLamB/YcsF family protein 
Protein accessionYP_002949946 
Protein GI239827322 
COG category[R] General function prediction only 
COG ID[COG1540] Uncharacterized proteins, homologs of lactam utilization protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000410312 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGTTG ATTTGAATTG CGATTTTGGC GAAAGCTTTG GAATATATCG CCTCGGCGAG 
GAAAAAGAGA TTTTGCAGTA TGTCACATCG GTCAATGTCG CTTGCGGCTT TCATGCCGGA
GATCCGCTTG TGATGCGGAA AACGGTGCAG ATGGCATTAG AGCAAAAAGT CGCGATCGGC
GCGCATCCAG GGTTTCCGGA CTTGCTTGGA TTCGGCCGGC GCAACATCGC GGTAACTCCA
GAAGAAGCGT ATGCGTATGT TGTTTATCAA ATTGGGGCGC TCGCTGCGTT TGTGAAAGCG
GAAGGAGGGA AGATGACGCA CGTCAAGCCG CACGGCGCCC TTTATAACAT GGCGGCGAAA
GACACGGCGC TGGCGGAGGC GATCGCCAAA GCGGTGTACG ATGTCGATCC AACCTTAATT
CTGTACGGAC TTGCCGGAAG CGAGCTGATT CGCGCCGGAA AGAAAATCGG CTTGCGGACG
GCAAGTGAGG TATTTGCCGA TCGAACGTAC CAACAAGATG GTTCATTGAC ACCAAGAAGC
GACCCGCGCG CGTTGATTGT CGATGAACAG GAAGCGGTTC TTCAGGTGCT TGCCATGGTG
AAAGAAAAAC GCGTCCGCTC TTTGCAAGGC ATCGATGTTC CGATTGAAGC GGAGACGATT
TGCATTCACG GGGACGGTAA GAAAGCGGTG CTGTTTGCGC AGCGGTTATA TGAGGCGCTG
CAGAAGGAAG GCGTGGATGT TTGTTCTATA AAATGA
 
Protein sequence
MRVDLNCDFG ESFGIYRLGE EKEILQYVTS VNVACGFHAG DPLVMRKTVQ MALEQKVAIG 
AHPGFPDLLG FGRRNIAVTP EEAYAYVVYQ IGALAAFVKA EGGKMTHVKP HGALYNMAAK
DTALAEAIAK AVYDVDPTLI LYGLAGSELI RAGKKIGLRT ASEVFADRTY QQDGSLTPRS
DPRALIVDEQ EAVLQVLAMV KEKRVRSLQG IDVPIEAETI CIHGDGKKAV LFAQRLYEAL
QKEGVDVCSI K