Gene GWCH70_1937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGWCH70_1937 
SymbolthiE 
ID7978761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacillus sp. WCH70 
KingdomBacteria 
Replicon accessionNC_012793 
Strand- 
Start bp1995442 
End bp1996101 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content47% 
IMG OID644798766 
Productthiamine-phosphate pyrophosphorylase 
Protein accessionYP_002949936 
Protein GI239827312 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0352] Thiamine monophosphate synthase 
TIGRFAM ID[TIGR00693] thiamine-phosphate pyrophosphorylase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0505249 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCCGAA TTGCAAGCGA AGTAATGAGA GAACGATTGA AAGTATATTT TATTATGGGA 
AGTACAAATT GTAAAAAACA GCCATTAGAA GTATTAACAG AAGCGATTGA TGGCGGAATT 
ACGCTGTTTC AATTTCGCGA AAAAGGGAGC GGTGCGCTTG TCGGTGAACA AAAATACGAG 
TTCGCCAGAC AGCTGCAAAA TATTTGCAAA AATCGCGGCA TACCGTTTAT CGTCAATGAC 
GATGTCGAAC TAGCGTTAGC TCTTGATGCC GATGGTGTGC ATATCGGGCA GGATGATGAA 
GATGCGCGCA TCGTCCGCGA AAAAATCGGC GATAAAATTC TTGGAGTGTC GGCACATAAT 
TTGAAAGAAG CGCAAGCGGC GATCGCTGCT GGTGCCGATT ATATCGGAGT TGGACCAATT 
TATCCAACGA AATCGAAAGA GGATGCGAAG AAAGCGCAAG GCCCTGAGAT TATTCGCTTT 
CTTCGTGGTC AAGGAGTCGA TATTCCGCTT GTGGCCATTG GAGGCATTAC CGCGGAAAAT 
GCCGGTGAAG TGATGAACGC CGGAGCGGAC GGTGTTTCCG TCATTAGCGC GATTGCTTCG 
GCTTCATCTC CGTTTCTGGC AGCAAAACAG CTCGTTCAAA CGGTATTCAA CAACAAATAA
 
Protein sequence
MARIASEVMR ERLKVYFIMG STNCKKQPLE VLTEAIDGGI TLFQFREKGS GALVGEQKYE 
FARQLQNICK NRGIPFIVND DVELALALDA DGVHIGQDDE DARIVREKIG DKILGVSAHN 
LKEAQAAIAA GADYIGVGPI YPTKSKEDAK KAQGPEIIRF LRGQGVDIPL VAIGGITAEN 
AGEVMNAGAD GVSVISAIAS ASSPFLAAKQ LVQTVFNNK