| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_1910 |
|---|
| Symbol | |
|---|
| ID | 7978738 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | - |
|---|
| Start bp | 1962990 |
|---|
| End bp | 1965248 |
|---|
| Gene Length | 2259 bp |
|---|
| Protein Length | 752 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644798741 |
|---|
| Product | DEAD/DEAH box helicase domain protein |
|---|
| Protein accession | YP_002949911 |
|---|
| Protein GI | 239827287 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.71131 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAA AAAGCTTATT CGAATTGATA GAACAATTGC GAAACGATCC GAATGTCGTG
TATTGGCATG AAATCGAACC ACAAGAAGCG AACACCGTTC CGATGCCGGA GCATCTTGAT
TTGCGTTTAC GAACAGCGCT CGAAAAGCGC GGCATCGCTT CTCTTTATAC ACATCAGGCA
GCCGCTTATG AAGCGGTGCA AAACGGAAAA AATATTGTTG CCGTTACTCC GACTGCTTCA
GGGAAAACGC TTTGCTACAA TTTACCTGTA CTGCAAGCGA TCGCAGAAAA TGAACATAGC
CGGGCGCTTT ATTTATTTCC GACAAAAGCG CTCGCGCAAG ATCAAAAAAG CGAATTGCAC
GAAATCATTG AGGAAATGGG CGTTCCGATT CATAGTTATA CATATGATGG CGATACAGCG
CCAGGCATTC GCCAAAAAAT TCGCAAAGCT GGCCATATTG TCATGACAAA TCCGGATATG
CTGCATTCTG CGATTTTGCC GCATCATACG AAATGGGTGG CGTTATTCGA AAATTTGCGG
TATGTCGTCA TCGATGAGCT TCATACGTAT CGCGGTGTGT TTGGAAGCCA CGTGGCAAAC
GTCATCCGCC GATTGAAGCG CATTTGTCAG TTTTACGGAA GCAAGCCGAT CTTTATTTGC
ACATCAGCGA CGATTGCCAA TCCGAAAGAA CTAGCCGAAC GCCTGACAGG GGAGCCAATG
ACATTGATTG ATAATAACGG GGCGCCGCGC GGAAGAAAAC ATTTTGTTTT TTATAATCCG
CCGGTTGTTC ATCAACCTCT TAATATTCGC AAAAGCGCTA CGGTCGAAGT AAACCGGCTA
GCAAAACAGT TTTTAGAAAA CGGCATTCAA ACAATTGTAT TTGCCCGCAG CCGTGTGCGT
GTCGAGCTGA TTTTAAGCCA TCTTCAAGAA CTTATTAAAG ATCAATTGGG CGCCAAAACG
ATTCGTGGGT ATCGCGGCGG TTATTTGCCA AAAGAAAGAC GGGAAATCGA AAAAGGATTA
CGGAGCGGGG AAATTATCGG AGTTGTTAGC ACGAACGCGC TTGAACTTGG CGTCGATATT
GGCCAGCTGC AAGTATGTAT CATGACAGGA TATCCCGGCA CGGTCGCAAG CACATGGCAG
CAGGCAGGAA GAGCTGGCAG ACGTCACGGC GATTCCCTTG TCATTATGGT AGCGAGCTCT
AGTCCGATTG ACCAGTACAT TGTGCAGCAT CCGGAGTATT TCTTTGGCCG TTCTCCGGAA
ACGGCGCGCA TCAACCCAGA CAACATGCTG ATTCTTGTCG ATCATCTCAA ATGCGCTGCA
TATGAACTTC CTTTCCGTCA AGGGGAAAAG TTTGGCGACC TCGAAGTGGA AGAAGTGCTT
GAGTTTTTAA CAGAACAAAA AGTATTGCAT TACCGTGCAG GCAAATGGTA TTGGATGAGC
GATGCGTTTC CGGCGCATGA TATTAGCTTG CGTTCTGCAT CCCAAGAGAA TGTCGTCATT
ATCGATATTT CGAAAACTGG CAACCATCGC GTCATCGGCG AGATGGATCG ATTTAGTGCA
ATGACGTTAT TGCACGAAGA GGCGATCTAT CTTCATGAAG GTGTGCAATA TCAAGTGGAA
AAGCTTGATT GGGAAGAAAA AAAGGCATAT GTTCGGGAAG TGAACGTAGA ATATTTTACG
GATGCGAATT TAGCTGTACA GCTTCATGTA TTAGAAGAAG ACCGCAACGA GCAAAGACAG
CTGCTGAGTC TGCATTACGG CGATGTTTCT GTTCGCGCGA AGGCTACCAT CTTTAAAAAA
ATTAAATTAT CCACATTTGA AAACATTGGC TCAGGGCCGA TCCATTTGCC GGAAGAAGAA
CTACATACGA CGGCAACATG GATCGAATTA GGAGAAGAAC TATCGAAAAT GGACGCGCCT
ATGCTCGAAC AAGCGCTCGT TGGCATTTCG AATGTGCTTC GTCACCTCGT ACCGATGTTT
GTCATGTGCG ACCGCACCGA TATTCACGTC GTACCACAAA TGAAAGCACC TCATTCCGGA
ATGCCGACGA TTTTTTTATA CGACCGTTAT CCAGGTGGCA TCGGCTTATC GGAAGCGGTT
TTTGAGCGGT ATGATGAAAT CATGGGAGAA GTGATACATT TACTTGAACG CTGCCCGTGT
GAAAATGGCT GCCCTTCTTG CATTGGGGTG ATCGAGGCAA GCAATCATTC CGTGAAAAAA
AACGTAATCG CATTTTTGCA CAAGCTTCTA AGCAAGTAA
|
|---|
| Protein sequence | MKKKSLFELI EQLRNDPNVV YWHEIEPQEA NTVPMPEHLD LRLRTALEKR GIASLYTHQA
AAYEAVQNGK NIVAVTPTAS GKTLCYNLPV LQAIAENEHS RALYLFPTKA LAQDQKSELH
EIIEEMGVPI HSYTYDGDTA PGIRQKIRKA GHIVMTNPDM LHSAILPHHT KWVALFENLR
YVVIDELHTY RGVFGSHVAN VIRRLKRICQ FYGSKPIFIC TSATIANPKE LAERLTGEPM
TLIDNNGAPR GRKHFVFYNP PVVHQPLNIR KSATVEVNRL AKQFLENGIQ TIVFARSRVR
VELILSHLQE LIKDQLGAKT IRGYRGGYLP KERREIEKGL RSGEIIGVVS TNALELGVDI
GQLQVCIMTG YPGTVASTWQ QAGRAGRRHG DSLVIMVASS SPIDQYIVQH PEYFFGRSPE
TARINPDNML ILVDHLKCAA YELPFRQGEK FGDLEVEEVL EFLTEQKVLH YRAGKWYWMS
DAFPAHDISL RSASQENVVI IDISKTGNHR VIGEMDRFSA MTLLHEEAIY LHEGVQYQVE
KLDWEEKKAY VREVNVEYFT DANLAVQLHV LEEDRNEQRQ LLSLHYGDVS VRAKATIFKK
IKLSTFENIG SGPIHLPEEE LHTTATWIEL GEELSKMDAP MLEQALVGIS NVLRHLVPMF
VMCDRTDIHV VPQMKAPHSG MPTIFLYDRY PGGIGLSEAV FERYDEIMGE VIHLLERCPC
ENGCPSCIGV IEASNHSVKK NVIAFLHKLL SK
|
|---|
| |