Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GWCH70_1896 |
Symbol | |
ID | 7978725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacillus sp. WCH70 |
Kingdom | Bacteria |
Replicon accession | NC_012793 |
Strand | - |
Start bp | 1945661 |
End bp | 1949347 |
Gene Length | 3687 bp |
Protein Length | 1228 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644798728 |
Product | Dynamin family protein |
Protein accession | YP_002949898 |
Protein GI | 239827274 |
COG category | [R] General function prediction only |
COG ID | [COG1159] GTPase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00444431 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGATCAG TCACTCAGCA AACATCGTTA ATGCCATGGT TAAAAAAAAT CATCGACGTG TACGATGCGT TTGTTGCTCA TGGCGATGAG ACAAATGCCA AAAAAGCGAA GCAGCTGCTT GAAAAAACGG CGAACGAACA ATTCGCCATC GCCTTTTGCG GTCATTTTTC CGCGGGAAAA TCGAGCATGA TTAACGCGCT TCTTGGCGAA CCGTTATTGC CATCCAGTCC GATTCCGACA AGCGCCAATC TTGTGAAAGT GAAATCAGGA CAAGAATACG TGCGGGTGTT TTACAAGCAT GAACCGCCGG TGGAGTACAA ACCGCCATAT CATCTTGAAC TTATTCGCGC TCAATGTAAA GATGGAGATG CGATTGAATT AATCGAAGTA AGCCGGCAAA CATCGCGCAT TCCAAACGGA ATTGTAATGA TGGATACGCC GGGAATCGAT TCCACTGATG ATGCGCATCG GCTTGCGACC GAATCGGCGC TTCACTTAGC CGATGTGGTG TTTTATATGA TGGATTACAA CCATGTGCAA GCGGAATTAA ATTTTCTATT TACGAAAGAA TTGACAAACT ACGGAAAAAC GTTATATCTC ATTATTAATC AAATCGATAA ACATCGTGAC AATGAGCTGT CGTTTCATGA ATTTCGCCAG TCCGTCGAGG AAGCGTTTCG AAATTGGGGC GTAAAGGCAG AACGCATATT TTTTACCTCT TTGAAAGCAC CGGATAATCC GCGTAACGAA TGGAACGAGC TAGTCGAGTG TTTTCAGAAG CTTTTCCGTG AAAAAGACGA ACGTCTTTTC TACGGTGTGG AGGTTGCGTT GAAGCGGCTT ATTGACGAAC ACGTTCGCTG GCTTGAGGAG AAAGATGCGG AGGAAGAAGA AGCGATCCGA GCTCGCCTTG CTGCACTTTT AAGTGATGAA ACGGAAGAAG AACAAATACG AAAGCGCCTT AACCGGATGC AAGAGGAACT CGAGCAGCTG GAAGCAGCCC ATATGAACTT GGAAACAGAA TTTCGCAAAG AGTTAGATCA TATTTTGGAG AATGCTTATA TCATGCCGTT TGAAACGCGG GAACTTGCGA AAGCGTATTT ACAATCCATG CAGCCGGATT TCAAAGTCGG TTTTTTATTT ACGAAAGGAA AAACCGAACA AGAACGGGCA AACCGGTTGC GTGCGTTTTA TGAAAACGTA AAAGAAAAAG CGGTTTCGCA AATCGAGTGG CACGTTCGCC AGCTGTTGAT CCGTTTTCTC AAAGAACACG ATATAGAGGA TTCCGTCCTG CTAAATCAAT GTCAGCAATG GACGGTGGAT TGGGAAGCGG ACGTTTTAAG CGCACTGGTG AAAAAAGGAG CAGGCGCAAC CGGAGAAGCC GTTCTGAATT ATACGAACGA TGTTGCTTAT GAAGTAAAAA AGCGATACCG AAATGTGGCA ATGCAGTTAT TTGAGAGATT ATTATCGAAA TGGAGAGAGC AAACAGAAGA AAAACGCCGT CATCTTGAAG ATCAAATTGC GTCGGAAACA GAAAAATATG AATGGATCGA ACGGCTTCAC CATCTTCAAA AAACGCGCAA GCAGGTGCAT GAAAATCTTG TTTGCTTGCT TTCGTCCAAT CGTGTTTTAG AAGATAGTGA TGACAAGCGG CTCGCGGAGT TGACCGCTTT GCCTGTGATA AGAAAGCTGG AATCTTCAGC GCTGACGGTT CCTTCGAAAC AAGATCACGA AAAGAAACGT CCGCACATCC CAGAACAAGC GCTCAGTCAG GGGAAATCCG CGCGGCAAAA AATACAAAAA ACGACAGAAT GTATACGACA AGCGGTAAAT ATCATCACTG GATTAAATGG AATGAATCGA TTTGTCCGCG AATTAACGGA GAAAGCCGAT CGCTTGGAAC ATCGCACCTT TACGGTTGCT CTTTTTGGAG CGTTCAGCGC TGGGAAGTCG TCATTTGCTA ATGCGCTTAT TGGAGAGAAG GTGCTGCCGT CATCTCCAAA TCCAACGACA GCGACGATTA ATAAAATTGT GCCGCCTACA GAAGAATATC CGCATGGTAC CGTGATCGTC CAAGTCAAAA GCGACAAGCA GCTTTTTTCA GACGTTCAAG CTTCGCTCCG CTATTTTCAT ATGAACGCGG AAACGTGGGA CGAAGCGCTT GCGATGTGCG AAAAGATAGC GGACTTGCAG GAGGCCGGTG CGCATGAAAA ACCGCATTAT TCTTTTCTTC AATCGGTTAT TTCCGGTTTT GAACGCATGA AAGACCACCT CGGCCGCAAG CTGCGCATCG GGATCGATGA ATTTGTTCAA TATGTCGCCG AAGAAACGAC CGCTTGTTTT ATCGAATCGG TCGAGCTGCA TTATGACTGT GAGCTCACCC GCCAAGGAAT TACGCTTGTC GATACGCCTG GAGCGGATTC CATTAATGCC CGTCATACGG GAGTGGCGTT CGAATATATT AAAAACGCCG ACGCGATTTT GTTTGTCACC TATTATAACC ATGCGTTTTC GAGGGCGGAT CGCGAATTTT TAATCCAACT TGGACGCGTC AAAGATACGT TTGCGATGGA TAAAATGTTT TTTATCGTCA ATGCCGCGGA TTTGGCTCAT TCAAGAGAGG AACTCAACGC AGTATTGGCG TATGTGGAAG AACAGCTTGC TCAATTTGGC ATTCGTTTTC CGCGCCTTTA CGCACTTTCC AGCCGTTTCG CCCTTGATGA AAAAACAGGC AAAAAAGCAG ATGGAGGATA CGGTTTCTTA ACAGAATCGG GAATTCGGCA GTTTGAAGAA GATTTTACTC GATTTATTAC GGAAGAGTTG ACGGAAGTAG CGGTTAGAGG CGCATATGCC GAAATGAAGC GCGCACAAAA GACGCTTCTT GACTATATTG ATGCCGCACA GCAAAGCAAT GAGGAAAAAG CCGCAAAACA ACGCGCGCTT TCGCAAGAGC AAACGGCGAT TCACAAGCTG CTTGACTCTG TCTCCATCGA CCATGATATA CATGCGATGA AACAAGAAAT CGCCGAGCTT GTTTATTATG TAAAACAGCG CGTATCATTC CGTTTCAACG ATTGGTTTAA AGAATCGTTC AATCCGGCTT CACTGCGCGA CGACGGCCGT GATATTCGCC AAGCACTTCG GGCGTGTTTA GAAGAATTGT TGCATTCTGT TGGATTTGAC TTGTCGCAAG AAATGCGTGC AACAAGCTTA AGAGTCGAGC GATTTTTAAA GGAGCGTCTT CATGAACAAT TTATGGATCT ATGCAACAAA ATCGAACGGA TTCATAAAGG AGTGCCTCTT TCTTCTTTAG AAACGATTTC GTTTTCCACT CCAGAATTTC CGCTCGGTTT CGAGCAAATC GATGAAGCAA GATTTTCTAA AGCACTGTCG ATGTATAAAA ACGCAAAATC GTTTTTTGAG CGGGATGAAA AGCGCTATAT GAAAGAAGAA ATAGAAAAAC AAATACAGCA GCCAATCGAC GATTATGCCG CTCGACAAGA ACAGCGTATG TTTCAGTTTT ATAAAGAGCA ATATGAAATG GCGATTAAAG AGTTTATCGC TTTTCTTGCA AGTCAAGTCG ATGACTATTT TTCTGGACTG CAGGCGACAC TACGGGCCGA AGTCGATGTC GAACAACTGC GCGAATGTGC GCGGCAGCTG TCGGGTTTAT TGGAGGAACA AGAATGA
|
Protein sequence | MGSVTQQTSL MPWLKKIIDV YDAFVAHGDE TNAKKAKQLL EKTANEQFAI AFCGHFSAGK SSMINALLGE PLLPSSPIPT SANLVKVKSG QEYVRVFYKH EPPVEYKPPY HLELIRAQCK DGDAIELIEV SRQTSRIPNG IVMMDTPGID STDDAHRLAT ESALHLADVV FYMMDYNHVQ AELNFLFTKE LTNYGKTLYL IINQIDKHRD NELSFHEFRQ SVEEAFRNWG VKAERIFFTS LKAPDNPRNE WNELVECFQK LFREKDERLF YGVEVALKRL IDEHVRWLEE KDAEEEEAIR ARLAALLSDE TEEEQIRKRL NRMQEELEQL EAAHMNLETE FRKELDHILE NAYIMPFETR ELAKAYLQSM QPDFKVGFLF TKGKTEQERA NRLRAFYENV KEKAVSQIEW HVRQLLIRFL KEHDIEDSVL LNQCQQWTVD WEADVLSALV KKGAGATGEA VLNYTNDVAY EVKKRYRNVA MQLFERLLSK WREQTEEKRR HLEDQIASET EKYEWIERLH HLQKTRKQVH ENLVCLLSSN RVLEDSDDKR LAELTALPVI RKLESSALTV PSKQDHEKKR PHIPEQALSQ GKSARQKIQK TTECIRQAVN IITGLNGMNR FVRELTEKAD RLEHRTFTVA LFGAFSAGKS SFANALIGEK VLPSSPNPTT ATINKIVPPT EEYPHGTVIV QVKSDKQLFS DVQASLRYFH MNAETWDEAL AMCEKIADLQ EAGAHEKPHY SFLQSVISGF ERMKDHLGRK LRIGIDEFVQ YVAEETTACF IESVELHYDC ELTRQGITLV DTPGADSINA RHTGVAFEYI KNADAILFVT YYNHAFSRAD REFLIQLGRV KDTFAMDKMF FIVNAADLAH SREELNAVLA YVEEQLAQFG IRFPRLYALS SRFALDEKTG KKADGGYGFL TESGIRQFEE DFTRFITEEL TEVAVRGAYA EMKRAQKTLL DYIDAAQQSN EEKAAKQRAL SQEQTAIHKL LDSVSIDHDI HAMKQEIAEL VYYVKQRVSF RFNDWFKESF NPASLRDDGR DIRQALRACL EELLHSVGFD LSQEMRATSL RVERFLKERL HEQFMDLCNK IERIHKGVPL SSLETISFST PEFPLGFEQI DEARFSKALS MYKNAKSFFE RDEKRYMKEE IEKQIQQPID DYAARQEQRM FQFYKEQYEM AIKEFIAFLA SQVDDYFSGL QATLRAEVDV EQLRECARQL SGLLEEQE
|
| |