| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_1856 |
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| Symbol | |
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| ID | 7976477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacillus sp. WCH70 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012793 |
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| Strand | + |
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| Start bp | 1921753 |
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| End bp | 1923120 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644798690 |
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| Product | multidrug efflux protein |
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| Protein accession | YP_002949860 |
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| Protein GI | 239827236 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.30191 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCAAA CGATGACACA CAAAGAGAAA ATCATACAGC TGCTTCATAT TTTTCTACCC
GTTTTTATTA CTCAAGTTGG TCAATATGCG ATGAACTTTG CTGACGTTAC GATGTCAGGA
CATGCCAGTT CAAGTGATTT AGCAGGAGTC GCGATTGGAT CAAGTTTGTG GGTTCCGATT
TTTACAGGAA TGAGCGGCAT TTTACTCGCT CTGACGCCAA TTGTCGCTCA ACATTTCGGA
GCAAAGCGGT ACGAGCAAAT TCCTCATGTG GTGATCCAAA CGATGTATTT AGCGATTGTG
ATCTCCCTAG CCATCATCGC TGGCGGTGCC GCCGCCTTAA ATCCGATTTT GAATCACATG
AATTTAGAAG CAGAAGTACA ACAAGTTGCT TATGATTATT TAATCGCCCT TTCATTTGGT
ATAATCCCGT TATTTCTTTA TTACGTTCTG CGCTGTTTTA TTGATGCGCT TGGCCAGACG
AAAATTACGA TGTTTATCAC ATTAACGGCA CTTCCCATTA ACATTTTGTT TAACTACTTA
CTCATTTATG GAAAATTTGG CTTTCCGAAG CTCGGCGGTG TCGGCTCTGG TTATGCAACG
ACGATCACAT ATTGGTATTC GTTTTTTATA GCGGTCATCA TCGTCCGCCG GTTTCAGCGA
TTTGATCGCT TTAACCTATT CGAGCGTTTT TATCGTATTT CTTTTGCCAC GTGGAAAAAA
CTATTAAAAA TCGGGCTTCC GATCGGTTTT GCGATTTTTT TTGAAACGAG CATTTTCGCC
GCTGTCACAT TGTTGATGAG CGAGTTTCAT ACGACGACGA TCGCCGCTCA TCAAAGCGCA
ATGAATTTCG CGTCGTTTCT TTATATGATC CCATTAAGCA TCTCTACAGC ATTGACGATC
GCCGTTGGTT TTGAAGTTGG AGCGAATCGT TATCAAGATG CAAAACAATA TAGCTTTATC
GGCATTGGAA TGGCAGTGTC AACAGCGGTT GTTACTTCGC TTTTGCTTTA TTTTTTCCGC
GGGGATATTG CCAAAATTTA TACGAACGAA CAAGATGTGC TATTTTTGAC GGAGCAATTT
TTACTATATG CGATTTTCTT TCAATTTTCG GATGCCGTAG CTGCTCCGAT TCAAGGCGCG
CTTAGAGGAT ATAAAGATGT CAACGCTACA TTTTGGGCCG CTTTTGTTTC GTATTGGTGC
ATTGGACTTC CTTTTGGTTA TACGCTTGCC AATTTCACTT CTTTCGAAGC GTTTGGATAT
TGGATTGGGC TGATTGCGGG ATTAGCTTCT GGGGCGATAT TCCTCTTTTT CCGCCTTCTC
TATGTCCAGC GCCGCTACAA GCATGTTCAT CATAATGAAA ACGGATGA
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| Protein sequence | MQQTMTHKEK IIQLLHIFLP VFITQVGQYA MNFADVTMSG HASSSDLAGV AIGSSLWVPI
FTGMSGILLA LTPIVAQHFG AKRYEQIPHV VIQTMYLAIV ISLAIIAGGA AALNPILNHM
NLEAEVQQVA YDYLIALSFG IIPLFLYYVL RCFIDALGQT KITMFITLTA LPINILFNYL
LIYGKFGFPK LGGVGSGYAT TITYWYSFFI AVIIVRRFQR FDRFNLFERF YRISFATWKK
LLKIGLPIGF AIFFETSIFA AVTLLMSEFH TTTIAAHQSA MNFASFLYMI PLSISTALTI
AVGFEVGANR YQDAKQYSFI GIGMAVSTAV VTSLLLYFFR GDIAKIYTNE QDVLFLTEQF
LLYAIFFQFS DAVAAPIQGA LRGYKDVNAT FWAAFVSYWC IGLPFGYTLA NFTSFEAFGY
WIGLIAGLAS GAIFLFFRLL YVQRRYKHVH HNENG
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