Gene GWCH70_1466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGWCH70_1466 
Symbol 
ID7976912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacillus sp. WCH70 
KingdomBacteria 
Replicon accessionNC_012793 
Strand
Start bp1538784 
End bp1541291 
Gene Length2508 bp 
Protein Length835 aa 
Translation table11 
GC content40% 
IMG OID644798370 
Productglycoside hydrolase family 2 sugar binding 
Protein accessionYP_002949543 
Protein GI239826919 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3250] Beta-galactosidase/beta-glucuronidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.13243 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAATCA ATAAAAATTG GAAGATACAG CATTTTGATG TAGGACAGGT AAGGGATTTA 
ACGATTGCAG ATCCAAACTA TATTGATCAC TTTTGGATAC CAGCAAAGGT GCCAGGAGAT
GTACATTCGA TTTTACGGGA AAAGAAATTG ATTGATGATC CCTTTTTCGG CTACAATGAT
TTGAAATCGA AATGGGTGGA AGAAAAGGTT TGGTGGTATC GTACGGAATT TACATTTGAT
AAAAACAATC TAGACAAAGA TGAACGGTTA GAGTTGATTT TTGAAGGCTT AGATACCTTT
GCGACTGTTT ATTTAAACGG AGTGGAATTA GGGACTACGG AAAATATGTT CATTTCTCAT
ACTTTTGATG TTACTAGAGA AATAGTGGAT GGAAGAAATG TTTTGGCAGT GAAATTTAAT
CCCGTTTCCT ATCAGTTAAA GGAGAAAGAG AAAAATTATT GGGCTGGATT TGGAAAAGAT
CGCATATGGG CGCGCAAGGC TCAATATCAT TTTGGCTGGG ACTGGGGTCC GCAAATTCTA
ACGGTAGGAA TTTGGAAAGA GGTGCGTTTA GAAAAAAGAA AAATTGCCAA AATCGAAAGT
GTTTACGCAA GAACACTTGA CTTGAAAGAT TCTCGGGCCG TTGTTCAAAT CGATATTTAC
ACCAAAAACT TTGTTAAGGG AAAAAGTTTA CAGGCGGAAG TGACGTTAAA AGATCGAGAA
CAACAATTTT TCCAAACCGT AAATATTGAT CAAAATCGAG CAACACTCAC TTTCAACATC
GACAATCCAA ACCTTTGGTG GACGCATGAT TTAGGAGAAC CGAATCTTTA TCAGCTATCT
GTCGTTTTAA AATGGGAAGG GGAAGTTCTA GACACATATC AAACAGAAAT TGGGATTCGT
ACGGTGGAAG TAATGAAAAG AGATCGCAAA GGGAATCCGC GGTTTACCTT TGTTTTAAAT
GGTGTAGAGA TATTTGCGAA AGGAGCGAAC TGGATTCCTA TTGACAGCTT TTTAGGATCT
GTACCGGAAT CACGCTATCG TCATCTTATT CAGCTTGCGA AAGAAGCGAA TATGAATATG
CTGCGTGTAT GGGGCGGTGG GATTTATGAA AAAGACATTT TCTATCAAGA ATGCAATCGC
CAAGGTATTT TAGTTTGGCA GGACTTTATG TTTGCCTGTG CGTTATACCC GGATTACAAC
CGCGATTATA TGGAAAACGT CCGCGAAGAA GTGATTTCGG TGATTAAGCG GCTTCGTAAT
CATCCTTGCA TCGCTTTATG GTGCGGAAAT AACGAAAACG ATTGGTTGTA TGAAGTGGAG
CATGCCGCTG GAAAAATTCA CACTCCTTTT TATGGAGAAA AAATATATCA TGAGTTAATT
CCTGAACTAC TGGAAGAATT AGATCCTTCC CGTCCATATT GGCCAAGTTC GCCATATGGC
GGCAATGATC ACAACTCACA AGAGGAAGGC GACCGGCATA ATTGGCAAGT TTGGCACGGG
AATGTGGAAC CTCGAAAATT CGGTCAGAAT TTAGGACAAA ACATCAGTGT GGAGGGGGTT
TCGTTTCGAA ATTATAAAAA AGATCGCACC CGGTTTTGCA GCGAGTTTGG CATGCATGCT
TCTGCCAATC GTTATACGCT GGAAAAAAAT CTGCCTGACG GAACTTTTTA TTGGGGCAGC
GATGAATTGG CATATCGCAA TAAAGATTTT CATCATGAAA AAGGGCTCTT ATTAATGGAA
GGATATACCG GCATTCCAAA AAATATTGAG GAATACATGA ATTATTCGAT GCTCACACAG
GCTGAAGGTT TAAAGTATGG AATGGAACAT TACCGCCGCA ATAAACCGCA AACAAGCGGG
GCTTTAATCT GGCAATTGAA TGATTGCTGG CCTGGCACGA GTTGGTCGAT GATCGATTAT
TACTTGTTGC CAAAGGCTTC ATATTATTAT AGTAAAAAAT TTAATGCCCC TCTTTTATAT
ACGCTTGAAC ATGACCCTGG CGATGATTTA CATCTATGGG TTGTGAATGA CCGATTAGAA
GATGTGAAAG ATACGCTGGT ATTCGAAGTG TTCCGATTTA ATGGCGAGTT AGTGTATTCG
AAAGAATTTT TGATCCATGT GAAAGGAAAT GCTTCGGTTC AAATTGCTTC CTTAACAGAA
GCGGAGGTTT TACAAGGCAA TCCTGCTGAA CAAGTTGTCG TCCGCTTAAA ATCGTTGAAT
AAAAAAGCAG AGGAAAACTA TTATTACCTA AGAAATCATA AAGATCTTCA GCTGCCTAAG
GCGAAATTGC AAGTAAAAGT GATGCCGGAA AAACAAGAAG TAGAAATTCG GACAGATTGT
TTTGCGCGTT TTGTTAAACT GGAACTTCCG GCAGAAAAGA TTATTTTTTC GGATAACTTC
TTCGACCTAC TTCCATCGGA GCGAAAGATC ATCAAGATTA GACATTTAGA TGGCAAGACT
ATTTCTTTAG ACGGTTTAAG CGTATCAGCC ATCAACGGCA GTGCTTGA
 
Protein sequence
MLINKNWKIQ HFDVGQVRDL TIADPNYIDH FWIPAKVPGD VHSILREKKL IDDPFFGYND 
LKSKWVEEKV WWYRTEFTFD KNNLDKDERL ELIFEGLDTF ATVYLNGVEL GTTENMFISH
TFDVTREIVD GRNVLAVKFN PVSYQLKEKE KNYWAGFGKD RIWARKAQYH FGWDWGPQIL
TVGIWKEVRL EKRKIAKIES VYARTLDLKD SRAVVQIDIY TKNFVKGKSL QAEVTLKDRE
QQFFQTVNID QNRATLTFNI DNPNLWWTHD LGEPNLYQLS VVLKWEGEVL DTYQTEIGIR
TVEVMKRDRK GNPRFTFVLN GVEIFAKGAN WIPIDSFLGS VPESRYRHLI QLAKEANMNM
LRVWGGGIYE KDIFYQECNR QGILVWQDFM FACALYPDYN RDYMENVREE VISVIKRLRN
HPCIALWCGN NENDWLYEVE HAAGKIHTPF YGEKIYHELI PELLEELDPS RPYWPSSPYG
GNDHNSQEEG DRHNWQVWHG NVEPRKFGQN LGQNISVEGV SFRNYKKDRT RFCSEFGMHA
SANRYTLEKN LPDGTFYWGS DELAYRNKDF HHEKGLLLME GYTGIPKNIE EYMNYSMLTQ
AEGLKYGMEH YRRNKPQTSG ALIWQLNDCW PGTSWSMIDY YLLPKASYYY SKKFNAPLLY
TLEHDPGDDL HLWVVNDRLE DVKDTLVFEV FRFNGELVYS KEFLIHVKGN ASVQIASLTE
AEVLQGNPAE QVVVRLKSLN KKAEENYYYL RNHKDLQLPK AKLQVKVMPE KQEVEIRTDC
FARFVKLELP AEKIIFSDNF FDLLPSERKI IKIRHLDGKT ISLDGLSVSA INGSA