| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_1464 |
|---|
| Symbol | |
|---|
| ID | 7976910 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | + |
|---|
| Start bp | 1536974 |
|---|
| End bp | 1537852 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 644798368 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002949541 |
|---|
| Protein GI | 239826917 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAA AGACAACATG GTTGGGGTGG CTTTTTGCCA GCCCCTACCT TATCTATACA
CTCATATTCT TTCTGTTTCC GTTGCTATGG GCTGTTTATT TAGCTTTTAC AAATTGGAAC
ATCATTGCTC CTGATTATGA AATGGTCGGA TTTCAAAATT TTATCGAAGC TTTTTTTAGC
AAAAGCGTAC GGGCCGCATT TTTGGTAACT TATAAATTTA TGCTCATGTT TGTTCCCATC
GTTATTGCGG GTTCACTCCT TTTAGCTTTA ATTATTCATT CTTTGCCTAG ACTTAAAGGG
TTGTTTGCTG TAGGATATTT CCTACCTTAC TTGGCATCAG GAGTGGCTTC TTCCATTGTT
GTCAATGGGG TGTTATCTTA TAACAGTCCA TTAAACGTTT TTTTTCGTAA GCATTTAGGT
TTAGATATTG ATTGGTTAGG TTCTCCAATT TTAGCGCCAC TAATCATTGC CCTTATGATG
GCGTGGAAAT TTGTGGGCTA TTATGCGCTG CTGTTTTTAT CAGGTTTAGA AAGTATACCT
AAAGAAATCT ATGAAGCAGC CGAAATGGAT GGTGCTGTTG GTTGGAAAAG ATTTTGGTAC
GTCACCATAC CGATGTTGCA TCCAGCGTTT TATACTGTCA CCATTTTAGC AGTAGGTCTA
ATGTTTGGGA TTTTTACTGA ACCGTATGTA TTAACTGGTG GAGGACCAGA TTATTCCACG
CATACATGGC AGTTAGAAAT TTATAACCAG GCATTTGAAA GATTAAATGC AGGATATGGA
ACGGCAATAG CAATCATAAA CTCTGTTGTC ACATTCGTTT CTATTCTAGT GTTTCGAAAG
CTTTTGGAAA AGTGGGGTGC CAGACATGGT TGGGAGTAA
|
|---|
| Protein sequence | MNKKTTWLGW LFASPYLIYT LIFFLFPLLW AVYLAFTNWN IIAPDYEMVG FQNFIEAFFS
KSVRAAFLVT YKFMLMFVPI VIAGSLLLAL IIHSLPRLKG LFAVGYFLPY LASGVASSIV
VNGVLSYNSP LNVFFRKHLG LDIDWLGSPI LAPLIIALMM AWKFVGYYAL LFLSGLESIP
KEIYEAAEMD GAVGWKRFWY VTIPMLHPAF YTVTILAVGL MFGIFTEPYV LTGGGPDYST
HTWQLEIYNQ AFERLNAGYG TAIAIINSVV TFVSILVFRK LLEKWGARHG WE
|
|---|
| |