| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_1391 |
|---|
| Symbol | |
|---|
| ID | 7978188 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | + |
|---|
| Start bp | 1461426 |
|---|
| End bp | 1462238 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 644798314 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002949487 |
|---|
| Protein GI | 239826863 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0395] ABC-type sugar transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGTGT TACGAACGTT TCTGTTGTAT GCCCTTCTCA TCATTTGTTC TGTTGTGGTG
CTGTTTCCGG TTGTTTACGC TTTTCTCATC AGTTTTATGG ACGGAGCGGA GGTGCTTCAG
GGACATATAT GGCCGCAGAA GTTTACGATG GCTAACTATG CTGCCGCGTT TCAGAAAGTT
CCGTTGCTAG AGTTTTTGTT AAACAGCTTT ATTGTTTCGT TGATTGTCAT GGCTGGACAG
TTAATCGTTT CGAGCTTAGC GGCATTTGCT TTCGTGTTTC TAAACTTCAA AGGGAGAGAT
GTTCTCTTTT TTCTATGTAT CGCAACGATG CTGATCCCTT GGGAGGCAGC GATGATTCCG
AATTTTTTGA CCGTTCAAAA ACTTGGTTGG CTGAATAGCT ATTTAGGATT GACGGTTCCA
TTTTTTGCTT TAGCTTTTGG CATATTTCTG TTGCGCCAGC ACTTTAAGAC GATTCCATTG
GAATTATATG AGGCGGCGCA AGTATCAGGG GTTGGCCGCT TTCGCTTCTT TTGGAATATT
GTTCTTCCGT TATCGAAAAC GAGCTTAATT ACATTAGGAG TTTACAGCTT TTTAACGACT
TGGAATATGT ATTTATGGCC TTTGCTCGTT ACCAATAATG ACCATGTTCG CACTGTCCAA
ATTGGATTAA AGCAAATGCA AACACAAGAA ATTTCGACAG AATGGGGGGT GGTGATGGCG
GCAGTTATCG TGGTCATTTT ACCAACATTA TTGCTGTTGT TTGTCGGACA AAAGCATCTT
CAAAAAGGAC TTATGCAGGG AGCGATTAAA TAA
|
|---|
| Protein sequence | MNVLRTFLLY ALLIICSVVV LFPVVYAFLI SFMDGAEVLQ GHIWPQKFTM ANYAAAFQKV
PLLEFLLNSF IVSLIVMAGQ LIVSSLAAFA FVFLNFKGRD VLFFLCIATM LIPWEAAMIP
NFLTVQKLGW LNSYLGLTVP FFALAFGIFL LRQHFKTIPL ELYEAAQVSG VGRFRFFWNI
VLPLSKTSLI TLGVYSFLTT WNMYLWPLLV TNNDHVRTVQ IGLKQMQTQE ISTEWGVVMA
AVIVVILPTL LLLFVGQKHL QKGLMQGAIK
|
|---|
| |