Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GWCH70_1267 |
Symbol | |
ID | 7976049 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacillus sp. WCH70 |
Kingdom | Bacteria |
Replicon accession | NC_012793 |
Strand | + |
Start bp | 1315898 |
End bp | 1316725 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644798212 |
Product | MIP family channel protein |
Protein accession | YP_002949385 |
Protein GI | 239826761 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000000541866 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACATCGT TTGTTGCTGA ACTGGTTGGG ACTGCGCTGC TCATTATTTT TGGCGGCGGT GTTTGCGCAG GAGTAAACTT AAAAAAATCA TTTGCGCACA ACTCTGGCTG GATCGTGATT ACCATGGGAT GGGGGCTTGC TGTTGCAATA GCGGTATATG CGGTTGGCCA ATTTAGCGGC GCTCACTTGA ATCCGGCGGT AACGCTTGCT TTAGCCTTCA ATGGCGATTT TCCATGGACA GATGTGCCAA AATACATTGT TGCACAAATG CTTGGTGCAA TGATTGGCGC TGTCATTGTC TATCTTCATT ATCTGCCTCA TTGGAAAGAA ACGGACGACC CTGGCGCAAA ACTTGGCGTA TTTGCAACAA GTCCTGCTGT TCCAAACTAT TTCGCAAACT TAATCAGCGA AATAATTGGC ACGTTTGTAT TAGTGCTTGG CATTTTAGCT ATTGGCGCCA ATAAATTTGC CGATGGGCTA AATCCATTTA TCGTCGGGTT TCTTATTGTC GCCATTGGTC TTTCCCTTGG CGGAACGACA GGATACGCCA TCAACCCGGC GCGTGATTTG GGACCGCGCA TTGCTCACTT TTTGCTCCCG ATACCGGGAA AAGGGTCGTC TAATTGGTCT TACGCATGGG TTCCGGTTGT CGGCCCGATT CTTGGCGGTT CGTTTGGCGG TTTATTTTAT AAAGCTGTCT TTCTAGGAAA AATGACAGCA GCATTTTGGT ATGTGCTTAT TGCTATAATA GTAGTACTCG CACTGACATT CATCAGCCAA GGAAAAACAC CGAATAGCTA TAATAAAGCA AAAAATGCTT TCATGTAA
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Protein sequence | MTSFVAELVG TALLIIFGGG VCAGVNLKKS FAHNSGWIVI TMGWGLAVAI AVYAVGQFSG AHLNPAVTLA LAFNGDFPWT DVPKYIVAQM LGAMIGAVIV YLHYLPHWKE TDDPGAKLGV FATSPAVPNY FANLISEIIG TFVLVLGILA IGANKFADGL NPFIVGFLIV AIGLSLGGTT GYAINPARDL GPRIAHFLLP IPGKGSSNWS YAWVPVVGPI LGGSFGGLFY KAVFLGKMTA AFWYVLIAII VVLALTFISQ GKTPNSYNKA KNAFM
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