Gene GWCH70_1228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGWCH70_1228 
Symbol 
ID7977699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacillus sp. WCH70 
KingdomBacteria 
Replicon accessionNC_012793 
Strand
Start bp1281250 
End bp1282872 
Gene Length1623 bp 
Protein Length540 aa 
Translation table11 
GC content45% 
IMG OID644798174 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_002949347 
Protein GI239826723 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGATGA ATGTGCCATT AAACATTTCG ACAATGTTAG AAAGAGCGGA AATGTTCTTT 
CCAACTAAAC AAGTCGTTTC CCGCATGAAA CGTGGCATTG TCCGCCATAC ATATAAAGAA
ATCGGTGAGC GGACAAGAAG GCTTGCCAGC GTATTGACAA GTTTGGGTGT TTCCGTCGGC
GACCGTGTCG GGACGTTTGC CTGGAATCAT CATCGTCATT TGGAAGCGTA TTTTGCGATA
CCAGGAATCG GCGCGGTGCT GCATACGATT AATATCCGCC TGTCACTGCA GCATATCGCC
TATATTATTA ACCATGCTGA CGACCGTGTA TTGTTAATCG ACGATGATTT GCTTCCAGCG
ATTGAAGCAG TGAAAGACAA TATTCCAAAC GTACGTGCTT TTATCATTAT GACGGATGAA
GCGGAACTTC CAAAAACAAC GCTTTCTCCT GTTTACCATT ATGAAAAATT ATTGGAACAA
GGAGATCCGA AATTTCCGTT TAAAAAAGAT CTAGATGAAT ACGAGCCGGC TGGAATGTGT
TATACATCAG CAACAACTGG AAATCCAAAA GGGGTTGTGT ATACGCATCG CAGCACGGTA
CTGCACAGCA TGGCGCTTGG ATTAGCAGAT ACACTAGGAT TATCGGAAAA AGACGTAGCG
ATGCCGGTCG TACCGATGTT CCATGTCAAT GCATGGGGCA TTCCATTTGC AGCGACATGG
TTTGGTACTA CATTAGTTAT GCCTGGACCG GCATTTACGC CGAAAGTATT GGCAGAATTA
ATTGAAAGAG AAAAAGTAAC CGTGACTGCG GGAGTGCCGA CTATTTGGCT CGGTTTGTTG
CAAGAATTAG AAAAAGGAAA CTATGATGTA AGCAGTTTAA CGCGGATCGT ATGCGGCGGT
TCGGCGGCGC CAAAAGGAGT GATCCGCGCG TTTGAAGAAA AATACAATAT CCCGTTTATC
CACGCCTATG GCATGACAGA AACAAGCCCG CTCGTTCTAG TATCGCGTCT AAAAAGCTAT
CAGCAAGACT TATCTTATGA GGAGCAATTA GAATTGCGCG CAAAACAAGG AATTCTTGTC
CCGGGTTTGG AAATGAAAGT GATTGGCAAG GACGGGGAGG TGCGCTGGGA CGGAAAAGAA
ATGGGCGAGC TATGTTTGCG CGGTCCGTGG ATTGCCGCGG AATATTATAA TGACGACCGG
ACAAGAGAGG CGTTCCGTGA CGGATGGCTG CATACAGGGG ATGTCGTCAA TGTCGATGAA
GAAGGGTTTG TCAAAATTGT GGACCGCACG AAAGATGTGA TTAAAAGCGG TGGAGAGTGG
ATTTCTTCCG TTGATTTAGA AAATGCGTTA ATGGCGCATG AAGCGGTGTT TGAAGCGGCA
GTTGTCGCTG TGCCGCATCC GAAATGGCAA GAACGCCCGA TTGCATGTGT CGTTTTAAAA
GAAGGAAAAA CGGTGACGAA AGAAGAGCTT TATGACTTTT TGCGGCCGCA GTTTACAAAA
TGGTGGCTGC CGGACGACAT TGTCTTTATG AAAGAAATAC CAAAAACGAG CGTCGGAAAA
TTTTTAAAAC GGAAGCTGCG TGAGGAGTTG CAAAACTATT ATTCTAGTAA GAATTCTCAA
TAA
 
Protein sequence
MMMNVPLNIS TMLERAEMFF PTKQVVSRMK RGIVRHTYKE IGERTRRLAS VLTSLGVSVG 
DRVGTFAWNH HRHLEAYFAI PGIGAVLHTI NIRLSLQHIA YIINHADDRV LLIDDDLLPA
IEAVKDNIPN VRAFIIMTDE AELPKTTLSP VYHYEKLLEQ GDPKFPFKKD LDEYEPAGMC
YTSATTGNPK GVVYTHRSTV LHSMALGLAD TLGLSEKDVA MPVVPMFHVN AWGIPFAATW
FGTTLVMPGP AFTPKVLAEL IEREKVTVTA GVPTIWLGLL QELEKGNYDV SSLTRIVCGG
SAAPKGVIRA FEEKYNIPFI HAYGMTETSP LVLVSRLKSY QQDLSYEEQL ELRAKQGILV
PGLEMKVIGK DGEVRWDGKE MGELCLRGPW IAAEYYNDDR TREAFRDGWL HTGDVVNVDE
EGFVKIVDRT KDVIKSGGEW ISSVDLENAL MAHEAVFEAA VVAVPHPKWQ ERPIACVVLK
EGKTVTKEEL YDFLRPQFTK WWLPDDIVFM KEIPKTSVGK FLKRKLREEL QNYYSSKNSQ