| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_1219 |
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| Symbol | |
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| ID | 7977690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacillus sp. WCH70 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012793 |
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| Strand | - |
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| Start bp | 1269784 |
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| End bp | 1271295 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644798165 |
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| Product | choline/carnitine/betaine transporter |
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| Protein accession | YP_002949338 |
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| Protein GI | 239826714 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA CAACAAGCGT GTTTTATTTT TCAATAGCAA TTGCTATTTT ATTTATTTTT
TGGGGAGTGA TTCCTGCCAA TAAACTGCCC GACTATAACT TAGGTGCTGT TAGTACAGCA
ATGCATTCCT TTTTAATTGA TAAATTCGGC TGGTTTTATT TATTGGCAGC AACGACATTT
CTTGCCTTTG GTTTGTTCTT AATTTTTTCT AAATACGGAA ATATTCGTCT TGGCGGAGAC
AATGAAAAGC CAGAGTATAG CAACATCACA TGGTTTGCGA TGTTGTTTAG TGCCGGTATG
GGAATCGGGT TAGTGTTTTG GGGGGTGGCT GAACCAGTTT CCCACTATTA TGCGCCACCT
GCCGGAGAAG GAGAAACGCC GGAAGCAGCC CGCATGGCGA TGCGATATGC CTTTTTTCAT
TGGGGGATTC ATCCGTGGGC GATTTATTGT GTAATTGCTC TAGCGCTTGC GTATTTCCAA
TTCCGCAAAA AAGAACCTGG GATTATTAGC CGTGTATTGC GGCCAATATT TGGCGATAAA
ATAAATGGCG CTATCGGCGT CGCGATTGAT ACGCTCTCTG TATACGCAAC GATCTTTGGT
GTTGCAACTT CGTTAGGGCT TGGAGCAATT CAAATTGCCG GAGGATTATC ACATTTATTT
CCATCCATAC CAAACAACTT TACAACTCAA TTATTGATCA TTATCGTTGT TACGTTTTTA
TTTATGCTTT CCGCGCAAAC AGGATTGAAT AAAGGAATTA AAATATTGAG TAACATAAAC
ATCATTCTTG CCGTCCTGCT GATGTTTTTT TTGCTTTTTG TTGGCCCGAC GAATTTTATT
ATGGATGTGT TTACAACGAC GATTGGTTCC TATTTGCAAA ACTTGCCGTC CATGAGTTTC
CGGTTGGCGC CGTTTGAACA AAGCGACTGG CCCAAATCGT GGACAATATT TTATTGGGCA
TGGTGGATTG CGTGGGCGCC GTTTGTTGGA ACGTTCATCG CCCGCATCTC AAAAGGTCGT
ACCATACGTG AATTTATGAT CGGTGTGTTA GCCGTTCCGA CCGTATTTAG TGCCTTATGG
TTTTCTGTCT TTGGTGGTTC GGCGTTATAT CTAGAACGGT TTCAACATAT CAGCATCATC
GATGTCATTA ACGAAAAAGG GATGGAATCA GCACTGTTTT TCACACTGCA GCAATTCCCA
TTTGGCACTA TTTTGTCGGG ATTAGCTATT TTATTAATTT GTACATTTTT CGTCACATCA
GCCGATTCCG CTACGTTCGT TCTCGGTATG CAAACAACAA AAGGAATGTT GAATCCGCCA
AATTCGGTAA AATTTATTTG GGGAATCGTT CAATCAGCAA CAGCTGCTAT CTTGCTTTGG
ACAGGCGGCT TAGAAGCACT GCAAACCGCA TCAATCATCG CGGCGTTTCC GTTTGCGATC
ATTATGATTT TGATCGTCAT CTCATTAATT CGTTCGTTTC AAAAAGAACC GATTGCCAAA
AAAAGAGTAT AA
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| Protein sequence | MKKTTSVFYF SIAIAILFIF WGVIPANKLP DYNLGAVSTA MHSFLIDKFG WFYLLAATTF
LAFGLFLIFS KYGNIRLGGD NEKPEYSNIT WFAMLFSAGM GIGLVFWGVA EPVSHYYAPP
AGEGETPEAA RMAMRYAFFH WGIHPWAIYC VIALALAYFQ FRKKEPGIIS RVLRPIFGDK
INGAIGVAID TLSVYATIFG VATSLGLGAI QIAGGLSHLF PSIPNNFTTQ LLIIIVVTFL
FMLSAQTGLN KGIKILSNIN IILAVLLMFF LLFVGPTNFI MDVFTTTIGS YLQNLPSMSF
RLAPFEQSDW PKSWTIFYWA WWIAWAPFVG TFIARISKGR TIREFMIGVL AVPTVFSALW
FSVFGGSALY LERFQHISII DVINEKGMES ALFFTLQQFP FGTILSGLAI LLICTFFVTS
ADSATFVLGM QTTKGMLNPP NSVKFIWGIV QSATAAILLW TGGLEALQTA SIIAAFPFAI
IMILIVISLI RSFQKEPIAK KRV
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