Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GWCH70_1210 |
Symbol | |
ID | 7977681 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacillus sp. WCH70 |
Kingdom | Bacteria |
Replicon accession | NC_012793 |
Strand | + |
Start bp | 1261297 |
End bp | 1263054 |
Gene Length | 1758 bp |
Protein Length | 585 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644798159 |
Product | amino acid permease |
Protein accession | YP_002949332 |
Protein GI | 239826708 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.177071 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTTCGT CGTTAAAACG ATTTTTAATT GGCAGACCAT TGAAATCAAC CGAACTAGGA GAACAAAAGC TGAACAAATT AAAGGCATTG GCTGTCTTAT CTTCTGATGC TCTATCTTCG GTTGCGTACG GTACGGAACA GATTTTGCTT GTTCTTGCGT CGATTGGAGC TATTGCATTT TGGTATTCCA TTCCTATTGC GATTGGAGTT CTTATTCTAT TGGTGGCGCT TATTTTATCG TATCGCCAAA TCATTTACTC TTATCCGCAT GGAGGAGGGG CTTACGTCGT TTCCAAAACG AACCTAGGCA TAAATCCGGG GCTCATTGCT GGAGGCTCTT TATTGGTCGA CTATATTCTA ACCGTGGCAG TAAGTGTGTC CGCGGGAACG GATGCCATTA CATCCGCGTT TCCAGTTTTG CATCAACACA CAGTAGGAAT TGCTGTCGCA CTGGTTGTGT TTATCACTAT TCTTAATCTG AGAGGCGTAA CCGAATCCGC TTCCGTTTTG GCATATCCCG TTTATTTGTT TGTGTTGGCG CTCGTAATTC TCATTATTGT TGGGATTTTT CATATTATAA ATGGACAAGC ACCGTCTACC TTACATACGC CGATCGGTAC TGTGGTGCCT GGAATTACAT TATTCTTGTT GCTTCGGGCG TTTGCATCTG GTTGCTCTGC GTTGACAGGG GTAGAAGCGA TCTCCAACGC CGTTCCAAAT TTCAAGGAAC CGGCGGCAAA AAACGCTGCT AAAACGTTAG TGATGATGGG GTTCATTCTC GCTTTTCTAT TTGTAGGAGT CACTTTTTTA GCATACTGGT ATGGAATTGC TCCGAAAGCG GAAGAGACGG TTGTCTCCCA ACTCGCTTCC GAAGTGTTTG GAAGAGGCTT TATGTATTAC TTTATCCAAG GAACAACTGC CCTTATTTTA GTCTTGGCTG CAAATACCGG GTTTTCCGCA TTTCCGCTGC TGGCATATAA TCTGGCATCC GATAAATACA TGCCAAGAAT GTATCTTATC CGCGGCGACC GCTTAGGATA TTCAAATGGA ATCATCACGC TTGGTCTTGC TTCTATTTTG CTGATTATCG TTTTTAAAGG GCAAACGGAA CAGCTCATTC CTTTGTATGC GGTTGGCGTA TTCATTCCTT TCACTTTGTC GCAAACAGGA ATGATTGTCA AATGGGTGCG CGAAAAACCG GCGGGGTGGG TCCCGAAGCT GCTTGTGAAC TTGCTGGGAG CGATCATTAC ACTAACTGTA CTGTGCATTT TCTTTATCAC AAAATTTGCT CAAGTATGGT CTGTGCTTGT ATTTCTTCCG ATAATCGTAT TTGTTTTTCA CCGAATCCAT AAGCACTATG ATGCTGTGGC AGAACAACTG CGGGTCAATC CAAATGAGAT TCTGGATAAA ATAGAAGGAA ATGTCGTCAT TGTACCTGTT GCGGGAATCA CAAAGGTAGT AGAGCAATCG TTAAATTACG CCCAAGCCAT TGGGGATTAT GTATTGGCTG TATATGTGGG ATTTGACCGG GAAAGCATGC TTCGAATGGA AGAGAAATGG AAGAAATGGA GGCCAGACGT TCGCCTTGTT ACACTAATTT CTTATTATCG CGATCTTATC ACGCCAATTT CCAAGCTAGT GGATACGATT GAAAGCAAGG CAGAGGAAAG AAATTATACA GTAACGGTTT TGATTCCTCA ATTTATACCA AAAAAGGGTG GCATAACTTT TTGCATAACC AATCCAGCGT TTTGTTGA
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Protein sequence | MFSSLKRFLI GRPLKSTELG EQKLNKLKAL AVLSSDALSS VAYGTEQILL VLASIGAIAF WYSIPIAIGV LILLVALILS YRQIIYSYPH GGGAYVVSKT NLGINPGLIA GGSLLVDYIL TVAVSVSAGT DAITSAFPVL HQHTVGIAVA LVVFITILNL RGVTESASVL AYPVYLFVLA LVILIIVGIF HIINGQAPST LHTPIGTVVP GITLFLLLRA FASGCSALTG VEAISNAVPN FKEPAAKNAA KTLVMMGFIL AFLFVGVTFL AYWYGIAPKA EETVVSQLAS EVFGRGFMYY FIQGTTALIL VLAANTGFSA FPLLAYNLAS DKYMPRMYLI RGDRLGYSNG IITLGLASIL LIIVFKGQTE QLIPLYAVGV FIPFTLSQTG MIVKWVREKP AGWVPKLLVN LLGAIITLTV LCIFFITKFA QVWSVLVFLP IIVFVFHRIH KHYDAVAEQL RVNPNEILDK IEGNVVIVPV AGITKVVEQS LNYAQAIGDY VLAVYVGFDR ESMLRMEEKW KKWRPDVRLV TLISYYRDLI TPISKLVDTI ESKAEERNYT VTVLIPQFIP KKGGITFCIT NPAFC
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