Gene GWCH70_1147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGWCH70_1147 
Symbol 
ID7977626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacillus sp. WCH70 
KingdomBacteria 
Replicon accessionNC_012793 
Strand+ 
Start bp1192351 
End bp1193496 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content45% 
IMG OID644798100 
Product1-deoxy-D-xylulose 5-phosphate reductoisomerase 
Protein accessionYP_002949273 
Protein GI239826649 
COG category[I] Lipid transport and metabolism 
COG ID[COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase 
TIGRFAM ID[TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0067748 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAATATA TTAGTATATT AGGGGCGAGT GGTTCCATCG GCACCCAGAC GTTGGATATT 
ATTCGTTCCC ATCCAGATGA GTTTCAATTG ACAGCAATAT CGATTGGAAA AAATGTGGAC 
ATGGCGCGAG CGATTATTGA AGAGTTTGCT CCTCGGCTTG TCGCTGTTGC TGAGGCGGAC 
GCTTATGAGA AGCTTCGCAG CGAATACGCA GGAAAAGTGA AAATCGTGTT TGGCGAGGAG 
GGATTAATTG AAGCAGCGGC TTTCCCAGAG ACGGATATCG TTGTGACAGC CGTTGTTGGA 
AGCGTAGGTC TTGTTCCGAC ACTAAGAGCT ATTGAAGCAG GCAAAACGAT TGCATTAGCG 
AACAAAGAAA CACTTGTAAC AGCAGGGCAT ATTGTAACAG CAGCCGCTAA AAAACACGGC 
GTTTCTTTAT TGCCAGTTGA CAGCGAACAC TCGGCAATTT TTCAATGTTT ACAAGGAGAA 
AAACGAAACC GTGTGGAAAA AATTATTTTA ACAGCCTCCG GCGGCAGCTT CCGTGATAAA 
ACAAGGGAAG AATTAAAAAA CGTAACAGTG GAAGAAGCGT TGCGCCATCC GAACTGGTCG 
ATGGGAGCAA AAATTACGAT TGACTCGGCG ACAATGATGA ACAAAGGGTT AGAAGTTATT 
GAGGCGCATT GGCTTTTCGA GTTGCCATAT GAGCAAATTG ATGTGTTATT ACATCGTGAA 
AGCATCATTC ATTCGCTCGT TCAATTCCGT GATACAAGCG TGATCGCCCA GCTCGGAACG 
CCAGATATGC ACGTACCGAT TCAATATGCT TTAACATACC CTGAACGCTT GCCGCTAGCC 
AATGCGAAAC CGCTTGACTT AGCAGAAATT AGCACATTAC ACTTTGAGCG GGTAGACTTT 
GAGCGTTTTC GTTGTTTACA ATTAGCATAT GAAGCAGGAA AAGCGGGCGG GTCGTTGCCA 
ACGGTGTTGA ACGCAGCGAA TGAAGAGGCA GTTTCCGCCT TTTTGCAAGG CCGTATCGCA 
TTTTTAACTA TTGAGGAATA TATTGAACGT GCACTAGAGC GGCATGAATT CGTAAATGAA 
CCATCGCTGG AGGAGATTCG TGAAATTGAT GCGGAAACCC GCCGGTACGT TCGGTCACTA 
CTATAA
 
Protein sequence
MKYISILGAS GSIGTQTLDI IRSHPDEFQL TAISIGKNVD MARAIIEEFA PRLVAVAEAD 
AYEKLRSEYA GKVKIVFGEE GLIEAAAFPE TDIVVTAVVG SVGLVPTLRA IEAGKTIALA 
NKETLVTAGH IVTAAAKKHG VSLLPVDSEH SAIFQCLQGE KRNRVEKIIL TASGGSFRDK 
TREELKNVTV EEALRHPNWS MGAKITIDSA TMMNKGLEVI EAHWLFELPY EQIDVLLHRE 
SIIHSLVQFR DTSVIAQLGT PDMHVPIQYA LTYPERLPLA NAKPLDLAEI STLHFERVDF 
ERFRCLQLAY EAGKAGGSLP TVLNAANEEA VSAFLQGRIA FLTIEEYIER ALERHEFVNE 
PSLEEIREID AETRRYVRSL L