Gene GWCH70_1138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGWCH70_1138 
Symbol 
ID7977619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacillus sp. WCH70 
KingdomBacteria 
Replicon accessionNC_012793 
Strand
Start bp1185743 
End bp1186507 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content41% 
IMG OID644798091 
ProductRNA polymerase sigma factor SigD 
Protein accessionYP_002949264 
Protein GI239826640 
COG category[K] Transcription 
COG ID[COG1191] DNA-directed RNA polymerase specialized sigma subunit 
TIGRFAM ID[TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000368739 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAACG TTTTAACGAG CGAAGAACGC AAATATTGGG ATCGTTGGAT ATATCACCGT 
GACCCGCAAG CCGGAGATAA GCTCGTGCAA ACATATATGC CGCTTGTTCA TTATCATGTT
CAACGAATAG CCGCGTCGTT GCCAAAAACT ATAAGTAAAC AAGAATTAAT AAGTCTTGGA
TTAATGGGGC TTTACGACGC GCTCGAAAAG TTTGATCCCT CCCGTGATTT AAAATTTGAT
ACGTACGCCT CATTTCGGAT TCGCGGCGCC ATTTTCGATG GGCTGCGCAA AGAAGATTGG
CTTCCGCGCA GCGTAAGGGA AAAGGCGAAA AAAATTGAGG AAACGATCGA AAAGCTGGAG
CAGCGGTATA TGCGGTCTGT TACAGCAAAA GAAGTTGCCG ATGAACTAGG GATCACAGAA
GAGGAAGTAT ATATGGCAGT AAATGAGAAC TTTTTTGCCA ACGTCTTATC TTTTCAACAT
GTTATTACGG AAAACAAGGA AGAAGAAAAC GCGCTTCTAG CCATTCGTGA TGAAAAAACA
CCTTCTCCGG AGGAAGAAGT TTTAAAGCAG GAATTGTATG AGAAATTGGC AGAAGTAATC
CAGCAGCTAA GTGAAAAAGA GCAGCTTGTT ATTAGTTTGT TTTATAAAGA AGAACTTACT
TTTACCGAAA TTGGAGAAAT TTTAGGACTT TCCACATCAA GAATTTCCCA GCTTCATTCA
AAAGCCATTT TTAAGCTGCG CAAAATTCTA GAACAAGCGC TTTAG
 
Protein sequence
MANVLTSEER KYWDRWIYHR DPQAGDKLVQ TYMPLVHYHV QRIAASLPKT ISKQELISLG 
LMGLYDALEK FDPSRDLKFD TYASFRIRGA IFDGLRKEDW LPRSVREKAK KIEETIEKLE
QRYMRSVTAK EVADELGITE EEVYMAVNEN FFANVLSFQH VITENKEEEN ALLAIRDEKT
PSPEEEVLKQ ELYEKLAEVI QQLSEKEQLV ISLFYKEELT FTEIGEILGL STSRISQLHS
KAIFKLRKIL EQAL