Gene GWCH70_1128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGWCH70_1128 
SymbolfliR 
ID7979292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacillus sp. WCH70 
KingdomBacteria 
Replicon accessionNC_012793 
Strand
Start bp1175058 
End bp1175831 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content43% 
IMG OID644798081 
Productflagellar biosynthesis protein FliR 
Protein accessionYP_002949254 
Protein GI239826630 
COG category[U] Intracellular trafficking, secretion, and vesicular transport
[N] Cell motility 
COG ID[COG1684] Flagellar biosynthesis pathway, component FliR 
TIGRFAM ID[TIGR01400] flagellar biosynthetic protein FliR 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCAAT TATTATTACA TTTTCCAGCA TTTTTGCTCG TTTTTGCGCG GGTCGCTTCC 
TTTTTTGCGA CATTGCCGCT GTTTTCGTAT CGAACGATTC CAGCGGTACA TAAAATCGGG
CTATCCTTTT TTCTAAGTTG GATGATGTTT TTTTCCATTT CTAAACCGGC AATCCCCTTA
GACGGAATGT ATGTGCTGCT AGTAGTTAAA GAAGTGCTTG TCGGTCTTTT TATAGGTCTA
TTTGCCTATA TGATTGTGTC GGCGATTCAA ATCGTTGGCG GGCTGATTGA TTTTCAAATG
GGGTTTGCCA TTGCCAATGT CATCGATCCG CAAACGGGTG CGCAAAGCCC GCTAGTGGGG
CAATATCTTT ATACGTTTGC TTTATTGTTG TTGCTCTCAG TCGATGGACA TCATTTGCTG
CTAGATGGAG TATTTTACAG TTATCGTTTT ATCCCGCTTG ATCATTGGCC GCATTTTGAC
CACGGCCATG TCGCTAAATA CATTGTCAAA TCGTTTAGCA CGATGTTTAT TATTGCTTTT
CAAATGTCGG TTCCACTTGT TGGCTCCTTA TTTTTAGTCG ATGTTGCGCT TGGAATTGTT
GCCCGCACCG TACCGCAGCT TAATATTTTC GTTGTCGGTT TTCCAGTAAA GATTGCGGCG
GCGTTTATAT TATTGATTGT AACGATGGCA ACGCTGTTTA TCGCTGTCCG CCATTTGTTC
GACATGATGT TTTTGGCGAT GCGTGAGCTG ATGAAGCTTT TAGGAGGCAC ATAA
 
Protein sequence
MEQLLLHFPA FLLVFARVAS FFATLPLFSY RTIPAVHKIG LSFFLSWMMF FSISKPAIPL 
DGMYVLLVVK EVLVGLFIGL FAYMIVSAIQ IVGGLIDFQM GFAIANVIDP QTGAQSPLVG
QYLYTFALLL LLSVDGHHLL LDGVFYSYRF IPLDHWPHFD HGHVAKYIVK SFSTMFIIAF
QMSVPLVGSL FLVDVALGIV ARTVPQLNIF VVGFPVKIAA AFILLIVTMA TLFIAVRHLF
DMMFLAMREL MKLLGGT