Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GWCH70_1104 |
Symbol | xerC |
ID | 7977591 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacillus sp. WCH70 |
Kingdom | Bacteria |
Replicon accession | NC_012793 |
Strand | + |
Start bp | 1156710 |
End bp | 1157612 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644798057 |
Product | site-specific tyrosine recombinase XerC |
Protein accession | YP_002949230 |
Protein GI | 239826606 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000000317379 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAATT CGAAAATTGC GTTAAAATTG TTCATAGAAT ATTTACAAGT CGAGAAAAAT TATTCACAAT ATACTATTGT GTGTTACCAA CGAGATGTAG AGCAGTTTTT CGAGTTTATG AATGAACAAG GGATTCATCA TCTGCATGAA GTAACGTATA ATGATGTTCG TCTCTATTTG ACGAAGCTGT ATGAACAAAA ACAGTCAAGC CGTTCCATTT CACGGAAAAT TTCTAGTTTG CGAAGCTTCT ATAAGTTTTT GCTGCGGGAA AAAAAGGTAA AAGAAAATCC GTTTGCGCTC GCTGCACTTC CGAAAAAAGA ACAAAAAATT CCTAATTTTT TATATGAGCA GGAATTAGAA AAACTTTTTT ATGTCAATGA TGTTAATACA GCGATCGGCC AACGCAATCA AGCGATTCTT GAGCTTCTCT ACGCGACGGG CGTCCGTGTT AGTGAATGTT GTCACATTCA ACTTTCTGAT ATCGATTTTT CTGTTTCCAC CATTTTGATT CATGGGAAAG GGAATAAACA GCGCTATGTC CCGTTTGGCC GTTTTGCCAA AGAAGCATTG GAGCGCTACA TTCATCATGG ACGGCGTGAG CTTTTGCAAA AAGCAAAAAG CGCTCATGCT TATTTGTTTG TCAACGCCCG CGGCAATCCG TTAACACCTC GGGGAGTGCG TTATATTTTG GATGAAATAG TAAAAAAAGC GGCGCTTACT CAAAATATTA GCCCACACGT GCTGAGACAT ACGTTTGCGA CTCATTTATT AAATGAAGGG GCCGATATGC GTACAGTTCA AGAATTGCTT GGACATGCGC ATCTTTCATC AACACAAGTG TATACCCATG TAACGAAAGA CCGGCTGCGC CATATTTATT TACATACGCA TCCGCGAGCA TAA
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Protein sequence | MENSKIALKL FIEYLQVEKN YSQYTIVCYQ RDVEQFFEFM NEQGIHHLHE VTYNDVRLYL TKLYEQKQSS RSISRKISSL RSFYKFLLRE KKVKENPFAL AALPKKEQKI PNFLYEQELE KLFYVNDVNT AIGQRNQAIL ELLYATGVRV SECCHIQLSD IDFSVSTILI HGKGNKQRYV PFGRFAKEAL ERYIHHGRRE LLQKAKSAHA YLFVNARGNP LTPRGVRYIL DEIVKKAALT QNISPHVLRH TFATHLLNEG ADMRTVQELL GHAHLSSTQV YTHVTKDRLR HIYLHTHPRA
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