| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_1076 |
|---|
| Symbol | |
|---|
| ID | 7977565 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | + |
|---|
| Start bp | 1128785 |
|---|
| End bp | 1129678 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 644798029 |
|---|
| Product | L-serine dehydratase, iron-sulfur-dependent, alpha subunit |
|---|
| Protein accession | YP_002949202 |
|---|
| Protein GI | 239826578 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1760] L-serine deaminase |
|---|
| TIGRFAM ID | [TIGR00718] L-serine dehydratase, iron-sulfur-dependent, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.036098 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGTTTC GCAACGTTGC TGAACTTGTG CAATTGGCGG AAAGCCAAAA CATTAAAATT
GCCGAAGTAA TGATTCGGCA AGAGATAGAA GTAACGGGGA GAAGCCGTGA AGAAATTTTT
GCGCAAATGG ATAAAAACTT GCAAGTAATG GAACAAGCGG TTGCAAAAGG GCTTGCCGGC
GTTGTCTCCA GATCGGGGCT CACTGGCGGG GATTCGGTGT TGTTGCAACA ATATATCAGA
CAAGGGAATT TTTTATCAGG AGAAACGATT TTAGATGCCG TTAGTAAAGC GGTGGCGACA
AATGAAGTAA ACGCGGCAAT GGGCGTCATC TGCGCGACGC CGACTGCGGG TTCCGCCGGA
GTTGTTCCGG GGACGCTTTT TGCAGTAAAA GAAAAATTAA AGCCGACGCG TGAAGAGATG
ATTGAATTTT TATTTACAGC GGGGGCATTC GGTTTTGTTG TTGCCAATAA CGCCTCCATC
TCTGGCGCGG CTGGAGGGTG TCAAGCGGAG GTCGGCTCAG CCGCGGGAAT GGCGGCGGCA
GCGTTAGTCG AACTTGCCGG GGGAACGCCG AGCCAAGCAG CGGAAGCGAT GGCGATCGCT
TTAAAAAATA TGTTAGGATT AGTATGTGAT CCTGTCGCTG GTCTTGTCGA AGTTCCATGT
GTAAAGCGAA ATGCGATGGG AGCGGCAAAT GCGATGGTAG CAGCAGACAT GGCGCTTGCT
GGTATTAAAA GCCGCATTCC ATGTGATGAG GTCATTGAAG CGATGTTTCG CATCGGTGAA
ACGATGCCAA CTGCATTGAA AGAAACTGCA GAAGGAGGGT TAGCAGCAAC GCCGACCGGC
CGCGCTTTAG CGGCAAAAAT TTTCGGCGTT TCAGCTAATA GCCGTGAATC GTGA
|
|---|
| Protein sequence | MMFRNVAELV QLAESQNIKI AEVMIRQEIE VTGRSREEIF AQMDKNLQVM EQAVAKGLAG
VVSRSGLTGG DSVLLQQYIR QGNFLSGETI LDAVSKAVAT NEVNAAMGVI CATPTAGSAG
VVPGTLFAVK EKLKPTREEM IEFLFTAGAF GFVVANNASI SGAAGGCQAE VGSAAGMAAA
ALVELAGGTP SQAAEAMAIA LKNMLGLVCD PVAGLVEVPC VKRNAMGAAN AMVAADMALA
GIKSRIPCDE VIEAMFRIGE TMPTALKETA EGGLAATPTG RALAAKIFGV SANSRES
|
|---|
| |