Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GWCH70_1061 |
Symbol | |
ID | 7976841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacillus sp. WCH70 |
Kingdom | Bacteria |
Replicon accession | NC_012793 |
Strand | + |
Start bp | 1114083 |
End bp | 1116497 |
Gene Length | 2415 bp |
Protein Length | 804 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644798014 |
Product | primosome assembly protein PriA |
Protein accession | YP_002949187 |
Protein GI | 239826563 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.964371 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTAG CAGCGGTTAT TGTAGATGTT CCTTCGCGTC AGACGGATCG GCCTTTTGAT TATGCCATCC CAAAAAAATG GGAAGATGTA TTGCAGCCAG GCATGCGTGT CACCGTTCCG TTCGGTCCGC GGCGATTGCA AGGGTTTGTG ATCGATATTA AGTCTCACTC GGACGTAAAA ACATTGAAAC CGATTGAAGA AGTGTTAGAT GTCACCCCTG TATTAAACGA AGAGCTGCTC GAGTTAGGGA AATATTTAAC AGAAACGACG CTTTGTTTTG CGATTTCCGC TTACCAAGCG ATGCTTCCGG CAGCGATGAA AGCAAAATAT GAAAAGGAAA TCCGGCTCGT TCGTACAGAA AATCGCTTTT TACTGCCAGA AGCGATTCAG CCGCTTTTTG TGGATCGCAC TGCCATTGAT TGGAAAGAAG TGGAGCATAG CGATCTGCTT TGGCCGTTGC AAAAGGCGAT TCAACAAGGC CATTTAGAAG TCGTATACCA TGTAAAAGAA AAAGCAACAG CAAAAACGGT GAAGTACGTG GAACTGGCGC AATCGCATGA AGAAATCGCG CGTGCCATTA ACGCATTGCC GGCAAACGCC GCCAAGCAAA AACAGTTGTT AACGGTTCTT CTGTCTGCGG ATGAAGCAAT GCCGTTGAAG CAGCTGTTAG AGCAGACCGA TGCTTCCTAT GCTTCGCTGA AAGCGTTGAC CGCAAAAGGA CTCGTTGTAG AAAAAGAAAT CGAAGTATAT CGCGATCCAT ATGAGCATCG TTCGTTTTCA AAAACAGCGC CGCTTCCGCT TACCGATGAG CAAGAAAAAG CACTTTCCGC CATTGTTGAG CGCGTAAGAG CCAATGAGCA TGAGGTGTTT TTGCTATACG GCGTGACGGG AAGCGGAAAA ACAGAAGTTT ACATGCAAGC GATTGAAGAA GTATTGCGGC AAGGAAAAGA AGCGATTGTT CTTGTTCCAG AAATTTCGCT GACGCCGCAA ATGGTCGAAC GGTTTAAAGG GCGTTTCGGT TCACAAGTGG CAGTGCTTCA TAGCGGCTTG TCTGTCGGTG AAAAATATGA TGAATGGCGA AAAATTCATC GGAAAGAAGT GCAGCTTGTC GTCGGCGCCC GTTCTGCTAT TTTCGCTCCG TTTGAAAATC TCGGCATGAT TATTATTGAT GAAGAACATG AGACAAGTTA CAAACAAGAA GAAAATCCGC GTTATCACGC CCGTGATGTG GCGATTTACC GCGCCCGCGT CCACGGATGT CCTGTCGTAC TCGGCAGCGC TACTCCTTCG CTCGAATCGT TTGCGCGGGC GAAAAAAGGG GTATATCAGT TACTGACATT ACAAAAGCGG GTAAGCGATA ATGGGATGCC GGACGTTCAT GTTGTAGATA TGCGGGAAGA ACTGCGGAGC GGAAACCGTT CGATGTTTTC GCGCTCGTTA TTTGAGAAGT TGAAAGACCG TCTTCATAAA GGAGAACAAT CTGTATTGTT TTTAAATCGG CGCGGCTACT CGACATTTGT TATGTGCCGT GATTGCGGTT ATGTGATTCG TTGTCCACAT TGTGATATTT CATTGACGTA TCATCGGGTC GAGCAGCGAT TAAAATGCCA TTATTGCGGG CACGAGGAGC CGATTACGTA TCGCTGTCCA TCATGCGGAA GTGAGCATAT TCGCTTTTTT GGAACGGGAA CGCAAAAAGT GGAAGAAGAA TTGACGAAAC TGCTTCCCGA AGCGCGCGTG ATCCGCATGG ATGTCGACAC AACGAGCCGC AAAGGCGCCC ACGAACGGCT GCTTGCTGAG TTTGGCGCAG GGAAGGCCGA TATTTTGCTT GGCACACAAA TGATTGCCAA AGGTCTTGAT TTTCCAAAAG TAACGCTTGT CGGCGTGTTG GCCGCAGATA CGATGCTCCA TCTTCCTGAT TTTCGCGCTT CAGAAAAAAC ATTTCAGCTG TTGACACAAG TAAGCGGGCG CGCTGGGCGC CACGAGCTTC CCGGCGAAGT CGTCATCCAA ACGTATACGC CGGAGCATTA CAGCATCACG CTTGCCGCTA AACACGATTA TGATGCATTT TATCAAAGAG AAATGGTGCT TCGTAAAATG TACGGCTACC CACCATTTTA CTATTTGACA TTAATCACCG TATCACATCC GGAAATAACG AAAGCGGTGG CTGTGACAGA AAAGATTGCG GCATATTTGC GGGCACAGCT GTCGAATGAA GCGATCATTC TTGGCCCTGT CGCTTCACCG ATTGCTCGAC TTCATGATAG ATATCGCTAT CAATGCATGA TAAAATACAA ACGGGTGCCG AACATGACAC GGGTATTAAA AGCGGTTATC GATCGTTATC AGCACGATGT TTCCCAAGGA GATTTATCGA TTACGATCGA TACGAACCCA TATACAATGA TGTAA
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Protein sequence | MKVAAVIVDV PSRQTDRPFD YAIPKKWEDV LQPGMRVTVP FGPRRLQGFV IDIKSHSDVK TLKPIEEVLD VTPVLNEELL ELGKYLTETT LCFAISAYQA MLPAAMKAKY EKEIRLVRTE NRFLLPEAIQ PLFVDRTAID WKEVEHSDLL WPLQKAIQQG HLEVVYHVKE KATAKTVKYV ELAQSHEEIA RAINALPANA AKQKQLLTVL LSADEAMPLK QLLEQTDASY ASLKALTAKG LVVEKEIEVY RDPYEHRSFS KTAPLPLTDE QEKALSAIVE RVRANEHEVF LLYGVTGSGK TEVYMQAIEE VLRQGKEAIV LVPEISLTPQ MVERFKGRFG SQVAVLHSGL SVGEKYDEWR KIHRKEVQLV VGARSAIFAP FENLGMIIID EEHETSYKQE ENPRYHARDV AIYRARVHGC PVVLGSATPS LESFARAKKG VYQLLTLQKR VSDNGMPDVH VVDMREELRS GNRSMFSRSL FEKLKDRLHK GEQSVLFLNR RGYSTFVMCR DCGYVIRCPH CDISLTYHRV EQRLKCHYCG HEEPITYRCP SCGSEHIRFF GTGTQKVEEE LTKLLPEARV IRMDVDTTSR KGAHERLLAE FGAGKADILL GTQMIAKGLD FPKVTLVGVL AADTMLHLPD FRASEKTFQL LTQVSGRAGR HELPGEVVIQ TYTPEHYSIT LAAKHDYDAF YQREMVLRKM YGYPPFYYLT LITVSHPEIT KAVAVTEKIA AYLRAQLSNE AIILGPVASP IARLHDRYRY QCMIKYKRVP NMTRVLKAVI DRYQHDVSQG DLSITIDTNP YTMM
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