Gene GWCH70_1019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGWCH70_1019 
SymbolmurD 
ID7976805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacillus sp. WCH70 
KingdomBacteria 
Replicon accessionNC_012793 
Strand
Start bp1069407 
End bp1070762 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content42% 
IMG OID644797972 
ProductUDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 
Protein accessionYP_002949145 
Protein GI239826521 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase 
TIGRFAM ID[TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAACAGA CAGCTTTCTA TCAACAACGT CGCGTGTTAG TCATCGGTTT GGCGAAGAGC 
GGATTTGCAG CGGCAAAACT GCTTCATGAG CTAGGAGCTA TCATCACGGT AAATGATCAA
AAGCCGTTTG AAGAAAATAA AGAAGCACAA CAGTTAGAAC AATTAGGAAT CCGGGTTATT
TGCGGCGGGC ATCCGCTTGA GCTCTTGGAT GAGCCGTTTG ATCTTGTCGT GAAAAACCCT
GGCATTCCAT ATACGAATCC AATGGTCAAA AAAGCAATGG AAAAAGGATT ACCCGTTGTC
ACAGAAGTGG AGTTAGCATA TCACATTTCA GAAGCGCCTT TTATTGGGAT TACCGGTTCT
AATGGAAAAA CAACAACAAC GACATTAATT TATGAAATGT TGCGTGAAGG AGAAAAACGC
CCGCTGCTTG CCGGAAACAT AGGGACGGCT GCTTGTGAAG TGGCAAAAAA GGCGGAAGCA
AGCAATTGGC TTGTAACAGA ACTTTCCTCC TTCCAGCTGG CGGGAATTCG CGACTTTCGT
CCGCGTATTT CCGTTTTATT AAACATTTTC GATGCCCATT TAGATTACCA TGGTACAAAA
GAAGCTTATG CGCAGGCAAA AGCAAATATT TTTAAAAACC AAACAAACGA AGATTATGCG
GTTATTAATG CCGATGATGA ACTTGTGATG CAGCTTGCTG AGAACATTCA TGCACAAAAA
GTTGCTTTTT CGGCAACAAA AGTGTTAGGC CGCGGTGCTT ATATAAACAA TGGTTTTATC
TATTGGAACG ATGAAGCGGT GATTGCTGTT GCCGATATCG TACTTCCTGG AAAACATAAT
TTGGAAAATA TATTGGCAGC TGTTGCTGTG GCAAAATTAG CAGGCGTAGA CAATAAATCC
ATTTATCAAG TCCTGACGAC ATTTACAGGA GTAAAGCATC GGCTTCAATA TGTTGCTACT
ATTGATGGGA GAAAGTTTTT CAATGACTCT AAAGCAACAA ATATTCTTGC GACACAAAAA
GCGTTGTCTG CTTTTGAAAA AGATTCTGTC ATCCTTTTGG CAGGTGGACT AGACCGCGGC
AATGAATTTG ATGCACTCCT TCCTTATTTG CACAACGTAA AAGCGGTCGT ATTGTTTGGA
CAAACCGCGC CAAAAATAGC CCGTGTCGCT AAGCAGGCGG GAATAGAAAC CATTGAATAT
GTCGATAATG TGGAAAAAGC GGTACCGGTT GCATATCAGC TATCTGAGCC AGGTGATGTC
ATTTTGCTGT CACCGGCATG TGCGAGCTGG GATCAATATA AAACTTTTGA ACAAAGAGGG
GACATTTTTA TAGGCGCGGT GCATAAGTTG AAATAG
 
Protein sequence
MKQTAFYQQR RVLVIGLAKS GFAAAKLLHE LGAIITVNDQ KPFEENKEAQ QLEQLGIRVI 
CGGHPLELLD EPFDLVVKNP GIPYTNPMVK KAMEKGLPVV TEVELAYHIS EAPFIGITGS
NGKTTTTTLI YEMLREGEKR PLLAGNIGTA ACEVAKKAEA SNWLVTELSS FQLAGIRDFR
PRISVLLNIF DAHLDYHGTK EAYAQAKANI FKNQTNEDYA VINADDELVM QLAENIHAQK
VAFSATKVLG RGAYINNGFI YWNDEAVIAV ADIVLPGKHN LENILAAVAV AKLAGVDNKS
IYQVLTTFTG VKHRLQYVAT IDGRKFFNDS KATNILATQK ALSAFEKDSV ILLAGGLDRG
NEFDALLPYL HNVKAVVLFG QTAPKIARVA KQAGIETIEY VDNVEKAVPV AYQLSEPGDV
ILLSPACASW DQYKTFEQRG DIFIGAVHKL K