| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_0672 |
|---|
| Symbol | |
|---|
| ID | 7978855 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | + |
|---|
| Start bp | 738803 |
|---|
| End bp | 739984 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644797657 |
|---|
| Product | nuclease SbcCD, D subunit |
|---|
| Protein accession | YP_002948831 |
|---|
| Protein GI | 239826207 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0420] DNA repair exonuclease |
|---|
| TIGRFAM ID | [TIGR00619] exonuclease SbcD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATTT TACATACAGC CGACTGGCAT TTAGGAAGAA CGCTGGAAGG AAGAAGCCGT
CTGCCGGAAC AGGAACAATT TATTGATGAG CTTGTCGACA TCGTGGAAAA AGAAAAAATT
GATGTCGTGT TAATGGCGGG AGATGTGTTT GATTCTGTTA ATCCGCCGGC AGCAGCTGAA
CAATTGTTTT ACGAAAGTCT TGCCCGCCTT TCAGATAAAG GAAAACGTCC GGTTGCTGTT
ATTGCCGGTA ACCATGACCA TCCGGAGCGG ATTAGCGCTG CTAGGAAATT AGTAGCCGAT
TACGGCATCC TTTTGCTAGG GTGGCCGGAT ACGACCGTCT ATCGCATTGA AGTGCCAGCG
CGAAATGAAA CGATGATGCT CGCTCCGCTC CCGTATCCTT CTGAATCGCG TTTAGCAGAA
TTGCTGTCCA AAGAACATTC CGAAATTTCT TTGCGTGACC GATACGACGA GCGCATTCGC
CATCTATTTG CAGCGATGTC CGCTTCGTTT TCGGAAAAGA CGGTAAACAT CGCAATGAGC
CATATTTATG TGGCGGGAGG AAGTACATCC GATTCGGAAC GGCCGATTGA AGTAGGTGGT
GCTTACACAG TAGCTGCTAC TAGTTTGCCA AAACAAGCTC AATATGTCGC GCTTGGCCAT
TTGCATCGGC CGCAAGATGT AAAACGTGCT GAAACGGCGG CGCGTTACTC TGGTTCACCG
CTTGCATATA GCTTTTCTGA AGCGGGATAC GCTAAATCTG TTACGATTGT TGATGTAAAA
CCAAGGGAAA AAGCGATAGT TTCCGAAATA CCGTTGTCCT CTGGCAAACC GTTAGTAAGG
TGGCAAGCAA CCGAAGGAAT TGCCCAAGTA TATCGCTGGT GTGAAGAAGG AAAAGATCCA
TCTGCATGGA TTGATTTGGA AATTCACCTT TCACAGCCGT TATCCATGGA GGAAATTTAT
CGATTGCGCA AGCTTCATTC TGGTTTTGTG CATATCCGTC CTGTCTTTCC AGAAAAAGAA
GAGCATATAG AGAATCGGAA GCAAGAGCGA TTATCATTAG AAGAAATGTT CCGCCGTTTT
TATGAGCGCC AGACAGGCGG CGGCAAGGCG GACGACGAGC TTGTCCGATT ATTTTTAGAA
CTGGTGGCGG AACAGGAAGA AGAGGGGGAG ACGGAAGAGT GA
|
|---|
| Protein sequence | MRILHTADWH LGRTLEGRSR LPEQEQFIDE LVDIVEKEKI DVVLMAGDVF DSVNPPAAAE
QLFYESLARL SDKGKRPVAV IAGNHDHPER ISAARKLVAD YGILLLGWPD TTVYRIEVPA
RNETMMLAPL PYPSESRLAE LLSKEHSEIS LRDRYDERIR HLFAAMSASF SEKTVNIAMS
HIYVAGGSTS DSERPIEVGG AYTVAATSLP KQAQYVALGH LHRPQDVKRA ETAARYSGSP
LAYSFSEAGY AKSVTIVDVK PREKAIVSEI PLSSGKPLVR WQATEGIAQV YRWCEEGKDP
SAWIDLEIHL SQPLSMEEIY RLRKLHSGFV HIRPVFPEKE EHIENRKQER LSLEEMFRRF
YERQTGGGKA DDELVRLFLE LVAEQEEEGE TEE
|
|---|
| |