| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_0651 |
|---|
| Symbol | |
|---|
| ID | 7978836 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | + |
|---|
| Start bp | 712763 |
|---|
| End bp | 714187 |
|---|
| Gene Length | 1425 bp |
|---|
| Protein Length | 474 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644797636 |
|---|
| Product | protoporphyrinogen oxidase |
|---|
| Protein accession | YP_002948810 |
|---|
| Protein GI | 239826186 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1232] Protoporphyrinogen oxidase |
|---|
| TIGRFAM ID | [TIGR00562] protoporphyrinogen oxidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0462523 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGTGGCG AAAAACGTAC GGTTGTGATC ATCGGAGGCG GAATAACAGG AATTGCCGTT
GCCTATTATT TGCAAAAAGC AATTAAAGAA CAACAGCTTC CTATTGAATG TAAACTGGTA
GAAGCGACCC ATCGTTTAGG CGGCAAAGTG CAAACAATGA TACGTGACGG TTTTGTGATT
GAGCGCGGTC CTGATTCGTT TTTAGCGCGG AAAACAAGCG CTTTTCGTCT TGTGCAGGAA
GTAGGGCTAG AAGACGAGAT TGTTCATAAC GCGACAGGAA AATCGTACAT TTTAGCCAAC
GGCAAGCTTT ATCCGATACC AGGCGGAGCC GTCATGGGGA TTCCGACACA AATCGGTCCG
TTTATCACGA CAGGGTTGTT TTCTCCGCTG GGAAAACTGC GTGCTGCCCT TGATTTTATT
TTGCCGCCGA CAAAAACAGA AGGCGATTTA TCATTAGGAC AATTTTTCCG CCGCCGATTT
GGCGATGAGG TGGTAGATAA CTTAATTGAG CCGCTGTTAT CTGGCATTTA TGCAGGCGAT
ATTGATCAAA TGAGTTTAAT GTCGACATTT CCGCAGTTCT TTCAATTGGA GCAGCGATAC
GGCAGCCTGG TGCGAGGTGC AAAACGAACG ACGCCGAAAG CAGCAAAACA ACGGAAAGGT
GCGTTTCAAA CATTAAAAAC GGGATTGCAA TCGTTAGTCG ATGAATTGGA AAAACGATTG
GAACAAGGCA GTGTCATGAA AGGGGTGCGG GTAGAAAACG TTAGACGCGA AGGAACGGAA
TATCGTTTGC GTTTAAGCAA TGGAGAAGTG TGGAAAGCAG ATAGCATTAT CGTCGCGATA
CCGCACTCAT CTGTACCAGC GATGTTTGCT GATTATCCGT TTTTCGCGCC GTTTCAATCA
GTTCCATCGA CGTCGGTAGC AACCGTGGCA TTGGCCTTTC CGGAAAGCGC TATTGAACAA
GATATTGATG GAACGGGCTT TGTCGTTTCC CGCCGCAATG ATTATACGAT TACGGCTTGC
ACATGGACAC ATAAAAAATG GCCGCATACC GCACCAAGCG GAAAAGCGCT GTTGCGTTGC
TATGTCGGCC GTCCTGGCGA TGAAGAAATT GTCGAACAGT CAGATGACGA AATCGTCCGC
GTCGTGCTGG ATGATTTAAA CAAAATTATG CGTATTACGG GACGTCCGGA ATTTTTCGTT
ATTTCGCGAT GGAAAAGGGC GATGCCACAA TATACGGTAG GCCATAAAGA GCGGCTTGCG
AATATAAAAG CACACATGGA CTCTGAGCTT CCAGGTGTGT TTTTAGCGGG AAGTTCGTAC
GAAGGATTAG GGCTGCCGGA TTGCATTGCC CAAGGGGAAG AAGCGGTAAA AAAAGTACTC
GATTATTTGC AAGTGAGCCA TCGAAAGTTT GCGGAGGTTA ACTAA
|
|---|
| Protein sequence | MSGEKRTVVI IGGGITGIAV AYYLQKAIKE QQLPIECKLV EATHRLGGKV QTMIRDGFVI
ERGPDSFLAR KTSAFRLVQE VGLEDEIVHN ATGKSYILAN GKLYPIPGGA VMGIPTQIGP
FITTGLFSPL GKLRAALDFI LPPTKTEGDL SLGQFFRRRF GDEVVDNLIE PLLSGIYAGD
IDQMSLMSTF PQFFQLEQRY GSLVRGAKRT TPKAAKQRKG AFQTLKTGLQ SLVDELEKRL
EQGSVMKGVR VENVRREGTE YRLRLSNGEV WKADSIIVAI PHSSVPAMFA DYPFFAPFQS
VPSTSVATVA LAFPESAIEQ DIDGTGFVVS RRNDYTITAC TWTHKKWPHT APSGKALLRC
YVGRPGDEEI VEQSDDEIVR VVLDDLNKIM RITGRPEFFV ISRWKRAMPQ YTVGHKERLA
NIKAHMDSEL PGVFLAGSSY EGLGLPDCIA QGEEAVKKVL DYLQVSHRKF AEVN
|
|---|
| |