Gene GWCH70_0606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGWCH70_0606 
Symbol 
ID7978795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacillus sp. WCH70 
KingdomBacteria 
Replicon accessionNC_012793 
Strand+ 
Start bp672838 
End bp673536 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content47% 
IMG OID644797594 
Producttranscriptional activator, TenA family 
Protein accessionYP_002948768 
Protein GI239826144 
COG category[K] Transcription 
COG ID[COG0819] Putative transcription activator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00086118 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATTTG CGATGGAATT GCGGAAAAAG GCCGATCCGA TCTGGCAGGC AAGCTTTCGC 
CATCCTTTTG TGAGAGAGTT AGGGGAAGGA ACGCTAGACC TTACTCGTTT CCGCTATTAT 
GTGATGCAAG ATGAGTATTA TTTGCACCAT TTTGCGAGAG TCCAGGCAAT TGGGGCAGCG 
AAGTCTCCAG ATTTAAAGAC AATCGCGAGC ATGGCGCATC ATGCCCAAAG CACATGTGAA 
GCAGAATTAT CTTTGCATGA AACGTTTTCC GAGCTGCTTG GGATCACGGA GGAAGAAAAA 
GCGTCATTTA TTCCTGCGCC GACCGCATAC GCGTATACGT CGCATATGTA CCGGGCTGCG 
TACGAAGGGC ATTTAGGTGA TGTGATTGCA GCGATTTTGC CGTGCTACTG GCTTTATTAT 
GAGATTGGCG AGAGGCTAAA GGACTGCAAG CCGAAAGAGC CGATCTATCA GAAATGGATT 
GGAACATATA GCTCCGAATG GTTTCGCAGC TTAGTAGAAG AACAAATCGC CCGTTTGGAT 
GCGATTGCGG AAGCAGTCAC CGAATCCGAT CGCAAACGGA TGGAACAGCA TTTTCTTATT 
AGCAGTGAAT ATGAATACGA ATTTTGGGAG ATGGCATATC GCTTAGAAAC ATGGCCATCA 
GCAAGAAAGG AGATCAAAGA ACATGTCAGC AACAACTAA
 
Protein sequence
MSFAMELRKK ADPIWQASFR HPFVRELGEG TLDLTRFRYY VMQDEYYLHH FARVQAIGAA 
KSPDLKTIAS MAHHAQSTCE AELSLHETFS ELLGITEEEK ASFIPAPTAY AYTSHMYRAA 
YEGHLGDVIA AILPCYWLYY EIGERLKDCK PKEPIYQKWI GTYSSEWFRS LVEEQIARLD 
AIAEAVTESD RKRMEQHFLI SSEYEYEFWE MAYRLETWPS ARKEIKEHVS NN