Gene GWCH70_0422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGWCH70_0422 
Symbol 
ID7978579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacillus sp. WCH70 
KingdomBacteria 
Replicon accessionNC_012793 
Strand
Start bp477170 
End bp478222 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content44% 
IMG OID644797408 
Productcalcium/proton antiporter, CaCA family 
Protein accessionYP_002948608 
Protein GI239825984 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0387] Ca2+/H+ antiporter 
TIGRFAM ID[TIGR00378] calcium/proton exchanger (cax)
[TIGR00846] calcium/proton exchanger 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00187889 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAG TATTTGCGCT GATGGTATGG ATCGGCGTTC CATTATCAGT AATCGGCAGT 
TTTCTTCATT GGCCTGTGGT CTTGATGTTT GCGGTGTATT GCTTAACGAT TATTGCTTTA
GCAAGCTATA TGGGACGCGC TACGGAAAGT TTGGCTATTG TAGCTGGACC GCGCATAGGG
GGATTGCTTA ATGCTACGTT TGGCAACGCA GTAGAGCTCA TTATTTCCAT TTTTGCTTTA
AAAGCGGGGC TCGTAGAAGT AGTGCTCGCC TCACTTACAG GTTCGGTGCT TGGCAACTTA
TTATTAGTGG CTGGCTTGTC TTTTTTTGTT GGCGGTCTTA AGTACAAGCG GCAGGAATTC
AATGTATATG ATGCCCGCCA TAACGCCGGA CTGCTTACGT TTGCCATTTT AGTGGCGTTT
GTGATTCCTG AAGTGTTTTC GATGAACATG TCTAGTCAAG AAAAGCTATC TCTTAGTGTC
GGTATTTCGA TTATTATGAT CCTTTTATAT TTAGCGGCCT TATACTTTAA GCTTGTCACA
CATCGCGGGG TATATCAACA AAAGTCTGAT GTAGTGGATG AACATGAAGA ACCAGAATGG
ACAAAAGGAA AGGCGATTTT GATTCTAGCG CTAGCAACCG CGGCAGTTGC CTACATATCC
GAGAGACTTG TCCATACGTT TGAAACGGTG GCGGAATCGT TCGGATGGAG CGAATTGTTT
ATCGGGATTA TCATTGTCGC CATCGTTGGA AACGCAGCGG AGCACGCCTC TGCCGTTATT
ATGGCATACA AAAATAGAAT GAATATCGCT GTTGAAATCG CGATCGGTTC AACGTTACAA
ATCGCTATGT TTGTTGCGCC TGTGCTTGTT CTTGTTTCAT TACTCTTTCC AGAAAAGATG
CCGCTTGTTT TTTCGCTTCC GGAATTGATC GCAATGGCGA CATCTGTATT ATTGACGATT
GTCATTTCTA ATGATGGGGA TACAAACTGG TTTGAAGGGG CGACATTGCT CGCGGCTTAT
ACGATTATGG GAATCGGCTT TTACTTGCTT TGA
 
Protein sequence
MNKVFALMVW IGVPLSVIGS FLHWPVVLMF AVYCLTIIAL ASYMGRATES LAIVAGPRIG 
GLLNATFGNA VELIISIFAL KAGLVEVVLA SLTGSVLGNL LLVAGLSFFV GGLKYKRQEF
NVYDARHNAG LLTFAILVAF VIPEVFSMNM SSQEKLSLSV GISIIMILLY LAALYFKLVT
HRGVYQQKSD VVDEHEEPEW TKGKAILILA LATAAVAYIS ERLVHTFETV AESFGWSELF
IGIIIVAIVG NAAEHASAVI MAYKNRMNIA VEIAIGSTLQ IAMFVAPVLV LVSLLFPEKM
PLVFSLPELI AMATSVLLTI VISNDGDTNW FEGATLLAAY TIMGIGFYLL