| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_0297 |
|---|
| Symbol | |
|---|
| ID | 7979094 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | - |
|---|
| Start bp | 336000 |
|---|
| End bp | 337127 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644797290 |
|---|
| Product | glycine betaine/L-proline ABC transporter, ATPase subunit |
|---|
| Protein accession | YP_002948490 |
|---|
| Protein GI | 239825866 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1125] ABC-type proline/glycine betaine transport systems, ATPase components |
|---|
| TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTCGCT TTGAAAACGT ATGGAAACAA TATGACGACG GTTTTGTCGC ATTGAAAAAT
ATTAATCTCG AAATTCAAAA AGGAGAATTG GTCACTTTAA TCGGGCCAAG CGGATGCGGA
AAAACGACGA CGATGCGGAT GATTAACCGC CTGACTGAAC CGACGTCTGG AACGATATAC
ATTGACGGGC AGGACATTGC AAAAATGAAT CCAGTGGAAC TACGACGCAA CATTGGCTAT
GTCATCCAGC AAATCGGGCT GTTCCCTCAT ATGACGATTG CGGAAAATAT CGCCTTAGTT
CCGAAACTAA AAAAATGGGA GCCGTCCGCC TATCAAAAAC GGGTTGACGA ACTGCTTGAT
CTTGTCGGAT TAGATCCAGC GATGTTTAAA CATCGCTACC CGTCGGAACT TAGCGGTGGC
CAGCAACAAC GAGTCGGCGT TATTCGCGCC CTTGCCGCAG AGCCTGACAT CATTTTGATG
GACGAGCCGT TCAGCGCGCT CGATCCGATC AGCCGCGAAC AGCTGCAAGA GGATATTGTG
AAATTGCAGG AAGAAATTCG AAAGACAATT GTGTTTGTCA CACATGATAT GGATGAAGCG
ATTAAAATTT CCAACCGTAT TGCAATTATG AAAGACGGAG AAATCGTGCA ATTTGCTACG
CCGGATCAAA TTTTGCGCCG TCCTGTCAAT TCATTCGTAC GCGACTTTAT TGGAGAGAAC
CGCCTTGCAC AAAGACAAAC GGCCGTGCCG ACAGCGGAAG ACTTAATGTC CCATTCCATC
GCTACGATAT CGCCGAAGCG CGGATTAGCC GAGGCCTTCC GGTTCATGAA AGAGAAAAAA
GTAGACAGCT TAATCGTTAC AGATAAAAAA CAATCCTTTC TTGGTGTCGT GACATTAAAA
AAACTAGAAA GACATTATCA GCAGGAACAT CTTCTTGTGA CCGACATCGC TGATTTCGAT
GTGACGACAC TAACAAAGGA TGCTGATGTG ACGGAAGTTG CGGAAATTTT CCAGCAACAA
GATGTCAGCG CCATCCCTGT ATTGGCCGGG AATCGCCTTG TCGGCGTTAT CACGAGATCG
AGCATGATGC GCGGGCTGGC GGAATGGGAG TTTCAAAAGC AACCGTGA
|
|---|
| Protein sequence | MIRFENVWKQ YDDGFVALKN INLEIQKGEL VTLIGPSGCG KTTTMRMINR LTEPTSGTIY
IDGQDIAKMN PVELRRNIGY VIQQIGLFPH MTIAENIALV PKLKKWEPSA YQKRVDELLD
LVGLDPAMFK HRYPSELSGG QQQRVGVIRA LAAEPDIILM DEPFSALDPI SREQLQEDIV
KLQEEIRKTI VFVTHDMDEA IKISNRIAIM KDGEIVQFAT PDQILRRPVN SFVRDFIGEN
RLAQRQTAVP TAEDLMSHSI ATISPKRGLA EAFRFMKEKK VDSLIVTDKK QSFLGVVTLK
KLERHYQQEH LLVTDIADFD VTTLTKDADV TEVAEIFQQQ DVSAIPVLAG NRLVGVITRS
SMMRGLAEWE FQKQP
|
|---|
| |