| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_0210 |
|---|
| Symbol | |
|---|
| ID | 7977953 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | + |
|---|
| Start bp | 228598 |
|---|
| End bp | 229761 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 644797188 |
|---|
| Product | alanine racemase |
|---|
| Protein accession | YP_002948407 |
|---|
| Protein GI | 239825783 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0787] Alanine racemase |
|---|
| TIGRFAM ID | [TIGR00492] alanine racemase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.584138 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAATT TGTTTTACCG CGATACTTGG GCAGAAATTG ATTTAGATGC CATTTACTAC
AATGTTTCAC AATTAAAAAA CTTTTTGCAA AACGACATCC GCATTATGGC GGTAGTGAAG
GCAAACGCAT ACGGCCACGG TGATGTACAA GTGGCAAAAA CAGCGCTTGA AGCAGGTGCT
TCTTATTTAG CAGTGGCGTT TTTAGACGAA GCGATTGCGC TAAGGAAAAA AGGAGTTACT
GCACCTATTC TTGTGCTAGG GGCTTGCCGG CCTAGCGATA TTAATATTGC CGCAAAGCAT
CGGATTACGC TCACTGTGTT TCAGCCGGAA TGGATAGAAC AAGCGGCAAA CGTATACAGC
GAAACGAGTC CCGTTTTATT TCATTTAAAA ATGGATACAG GAATGGGACG GTTAGGTGTC
AGGGAGGAAA CGGAAACAAA GCGCGTCATT GAACAAATTG ACCGACATCC GTATTTTTCA
TTGGAAGGAG CATATACTCA TTTTGCTACA GCTGATGAAA TAAACACGGA CTATTTTTCT
TTCCAATACG ATAATTTTTT GCGAATGCTT GAATGGCTTC CATATAAACC ACCGATTATC
CACTGCGGAA ACAGTGCGAC AGCTTTACGG TTTCCGGATA AAGCCTTTAA TATGGTGCGC
TTTGGCATTT CAATGTATGG TCTATCTCCT TCACCGGAAA TCAAACAATA TTTGCCGTAT
GAGCTAAAAG AAGCTTTTTC ATTGCATAGC CGTCTCGTTC ATGTGAAAAA GTTAAAGCCT
GGAGAAAAGG TGAGTTATGG AGCGACATAT ACGGCGGAAA CGGAGCAGTG GGTTGGAACG
GTCCCGATTG GATATGCAGA TGGTTGGTTG CGTAAACTGC AAAATTTCCA TGTACTTGTG
AACGGAGAAA AAGCGCCGAT TATCGGAAGA ATTTGCATGG ATCAATTAAT GGTCCGTCTG
CCGAAGCAAA TGCCTGTTGG AACGAAAGTG ACGCTGATTG GGCGGCAAGG CGACGAATAT
ATTTCTGTTG ATGACGTGGC TCAATATCTT GGAACGATTA ACTATGAGGT TCCTTGTACA
ATAAGTTATC GCGTTCCCCG TATTTTTTTC AGAAATAAGA GTATAATGGA AGTGAGAAAT
TTTGTTTTGG ATGGCAATGA TTAA
|
|---|
| Protein sequence | MSNLFYRDTW AEIDLDAIYY NVSQLKNFLQ NDIRIMAVVK ANAYGHGDVQ VAKTALEAGA
SYLAVAFLDE AIALRKKGVT APILVLGACR PSDINIAAKH RITLTVFQPE WIEQAANVYS
ETSPVLFHLK MDTGMGRLGV REETETKRVI EQIDRHPYFS LEGAYTHFAT ADEINTDYFS
FQYDNFLRML EWLPYKPPII HCGNSATALR FPDKAFNMVR FGISMYGLSP SPEIKQYLPY
ELKEAFSLHS RLVHVKKLKP GEKVSYGATY TAETEQWVGT VPIGYADGWL RKLQNFHVLV
NGEKAPIIGR ICMDQLMVRL PKQMPVGTKV TLIGRQGDEY ISVDDVAQYL GTINYEVPCT
ISYRVPRIFF RNKSIMEVRN FVLDGND
|
|---|
| |