Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GWCH70_0051 |
Symbol | |
ID | 7978489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacillus sp. WCH70 |
Kingdom | Bacteria |
Replicon accession | NC_012793 |
Strand | + |
Start bp | 62530 |
End bp | 63066 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644797011 |
Product | transcriptional regulator, AbrB family |
Protein accession | YP_002948259 |
Protein GI | 239825635 |
COG category | [K] Transcription |
COG ID | [COG2002] Regulators of stationary/sporulation gene expression |
TIGRFAM ID | [TIGR01439] looped-hinge helix DNA binding domain, AbrB family [TIGR02851] stage V sporulation protein T |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCAA CTGGTATTGT TCGCCGAATT GATGATTTAG GAAGGGTTGT CATTCCGAAA GAAATTCGAA GAACGTTGCG TATCCGAGAA GGGGACCCGC TTGAAATATT TGTTGACCGT GACGGAGAAG TTATTTTAAA AAAATATTCG CCAATTAGTG AATTAGGTGA TTTTGCAAAA GAATATGCAG AGGCGTTGTT TGACAGTTTA GGACAGCCTG TGTTGATTTG CGACCGAGAT GTTTTTATTG CAGTAGCGGG TGTTTCGAAA AAAGAATATT TGAACAAAAA TGTCGGTCCA TTAGTGGAAA AAGCGATGGA AGAACGAAAT TCTGTCCTTC ACACAGAAGA AGGAGAGACC GAACTCGTTG ACGGAGTTTC TGAAATGTTA AAATCGTATA CAATTGGACC GATTGTAGCA AACGGAGATC CGATTGGCGC CGTTGTCATT TTATCAAAAG ATAAAGTGCT TGGTGAAGTA GAACATAAAG CAGTCGAAAC AGCTGCTAGC TTCTTGGCTC GACAAATGGA GCAATAG
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Protein sequence | MKATGIVRRI DDLGRVVIPK EIRRTLRIRE GDPLEIFVDR DGEVILKKYS PISELGDFAK EYAEALFDSL GQPVLICDRD VFIAVAGVSK KEYLNKNVGP LVEKAMEERN SVLHTEEGET ELVDGVSEML KSYTIGPIVA NGDPIGAVVI LSKDKVLGEV EHKAVETAAS FLARQMEQ
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