| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_0043 |
|---|
| Symbol | |
|---|
| ID | 7978483 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | + |
|---|
| Start bp | 53681 |
|---|
| End bp | 54055 |
|---|
| Gene Length | 375 bp |
|---|
| Protein Length | 124 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 644797003 |
|---|
| Product | endoribonuclease L-PSP |
|---|
| Protein accession | YP_002948251 |
|---|
| Protein GI | 239825627 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
|---|
| TIGRFAM ID | [TIGR00004] endoribonuclease L-PSP, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.00285503 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGG TAGAAACGAA TAAAGCGCCG CAAGCGATCG GTCCGTATTC GCAAGGAATT
ATCGTCAATA ACATGTTTTA CAGCTCGGGG CAAATTCCGC TCACTCCTGA AGGAGAGATG
GTACAAGGCG ACATAAAAGC ACAAACAAAT CAAGTATTTC AAAACTTAAA AGCCGTTTTG
GAAGCGGCTG GCGCATCGCT TGATACAGTA GTCAAAACGA CGGTGTTTTT GAAAAACATG
GATGACTTTG CGGCAATGAA TGAAGTATAT AGTGAATATT TCACTAACCA TAAACCGGCG
CGCTCGTGCG TGGAAGTGGC GAGACTGCCG AAAGACGCGC TTGTCGAAAT TGAAGTAGTC
GCGTTGATTC GATAA
|
|---|
| Protein sequence | MKKVETNKAP QAIGPYSQGI IVNNMFYSSG QIPLTPEGEM VQGDIKAQTN QVFQNLKAVL
EAAGASLDTV VKTTVFLKNM DDFAAMNEVY SEYFTNHKPA RSCVEVARLP KDALVEIEVV
ALIR
|
|---|
| |