Gene GWCH70_0036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGWCH70_0036 
Symbol 
ID7978477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacillus sp. WCH70 
KingdomBacteria 
Replicon accessionNC_012793 
Strand+ 
Start bp48529 
End bp49092 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content40% 
IMG OID644796996 
Productprimase/topoisomerase like protein 
Protein accessionYP_002948244 
Protein GI239825620 
COG category[L] Replication, recombination and repair 
COG ID[COG1658] Small primase-like proteins (Toprim domain) 
TIGRFAM ID[TIGR00334] ribonuclease M5 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.278687 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATTA AAGAAATTAT TGTTGTGGAA GGAAAAGACG ATACAGTGGC GATTCAGCGC 
GCCGTTGATG CAGATACCAT TGAAACGAAC GGGTCGGCAA TTAGTGAAGA AACGATTGAA 
CGAATTAAAT TAGCAAAAGA AAAACGTGGC GTAATTATTT TTACGGACCC TGATTTTCCA 
GGTGAAAAAA TTCGCAAAAC GATTACAGAG CGTGTTCCAG GCTGCAAACA TGCTTTTTTG 
CCAAGAAAAG CGGCTATTGC GAAAAATGGG AAAGGAATTG GCGTAGAACA TGCGTCTGTG 
GAAGATATCC GTCAAGCGTT GAAAAACGTG TACGAGGAAA CAACAGAGTG GAAGGAAGAG 
ATTACGTTTG ATGAACTCGT TGCTGCTGGT TTAATCGGTG GAGAATTAGC GAAAAAGCGG 
CGCCAACATT TAGGTGAAAT TTTAAAAATA GGATATACAA ACGGAAAGCA GCTTTATAAG 
CGATTGCAAG TATTTCAAAT CTCTAAAGAA ACATTTTATG CAGCATTAGA GCAAGTATTG 
CAGGAGGAAG CAAATGATGA ATAA
 
Protein sequence
MKIKEIIVVE GKDDTVAIQR AVDADTIETN GSAISEETIE RIKLAKEKRG VIIFTDPDFP 
GEKIRKTITE RVPGCKHAFL PRKAAIAKNG KGIGVEHASV EDIRQALKNV YEETTEWKEE 
ITFDELVAAG LIGGELAKKR RQHLGEILKI GYTNGKQLYK RLQVFQISKE TFYAALEQVL 
QEEANDE