Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GWCH70_0028 |
Symbol | |
ID | 7978471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacillus sp. WCH70 |
Kingdom | Bacteria |
Replicon accession | NC_012793 |
Strand | + |
Start bp | 40420 |
End bp | 41247 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644796988 |
Product | PSP1 domain protein |
Protein accession | YP_002948236 |
Protein GI | 239825612 |
COG category | [S] Function unknown |
COG ID | [COG1774] Uncharacterized homolog of PSP1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTATAATG TCGTCGGTGT TCGCTTTAAA AAAGCGGGAA AAATTTATTA TTTCGATCCT GGAGAATTGT CGATTTCTGC TGGGGAGTTC GTCATTGTAG AAACCATTCG AGGGATCGAA TATGGAAAAG TTGTCATTAG CAACAAACAA GTCGACGAAA ATGATATCGT TTTGCCGTTG AAAAAAGTGA TTCGCGTCGC GGACGCGAAA GATAAATTAA TTGTTGAGGA AAACAAAAAA GCGGCACGGG AAGCGTACGA TATTTGCTTA AAAAAAGTAG AAGAGCATGG CTTGGAAATG AAATTAGTCG ATGTGGAATA TACGTTTGAC CGCAATAAAG TGATTTTTTA TTTTACTGCA GACGGGCGTG TGGATTTCCG CGAACTTGTC AAAGATTTGG CAGCCATTTT TCGCACGCGC ATTGAATTAA GACAAATCGG TGTTCGCGAT GAAGCAAAAA TGCTTGGCGG GATCGGTCCG TGCGGAAGAA TGCTTTGCTG CTCAACATTT TTAGGAGATT TTGAACCAGT ATCCATTAAA ATGGCGAAAG ACCAAAACTT ATCGCTCAAT CCGACGAAAA TTTCCGGTCT TTGCGGCCGG TTAATGTGTT GCTTAAAATA CGAAAATGAT GAATATGAAA CAGCGAAAGA GCAGCTCCCT GATTTAGGGG AGTATGTGGA AACTCCGCAT GGTCTTGGAA AAGTGATCGG ATTAAATATT TTAGAACGAG TATTGCAAGT GGAATTATCG GAACATGGAC GGGTCGTGGA ATATACGCTC GACGAGTTGA TGAAAGATGG AACGTTACCA GTCCAAGCCA CAGACTAA
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Protein sequence | MYNVVGVRFK KAGKIYYFDP GELSISAGEF VIVETIRGIE YGKVVISNKQ VDENDIVLPL KKVIRVADAK DKLIVEENKK AAREAYDICL KKVEEHGLEM KLVDVEYTFD RNKVIFYFTA DGRVDFRELV KDLAAIFRTR IELRQIGVRD EAKMLGGIGP CGRMLCCSTF LGDFEPVSIK MAKDQNLSLN PTKISGLCGR LMCCLKYEND EYETAKEQLP DLGEYVETPH GLGKVIGLNI LERVLQVELS EHGRVVEYTL DELMKDGTLP VQATD
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