| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_0011 |
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| Symbol | |
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| ID | 7978449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacillus sp. WCH70 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012793 |
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| Strand | + |
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| Start bp | 20361 |
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| End bp | 21245 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644796965 |
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| Product | pyridoxal biosynthesis lyase PdxS |
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| Protein accession | YP_002948219 |
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| Protein GI | 239825595 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0214] Pyridoxine biosynthesis enzyme |
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| TIGRFAM ID | [TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00000284564 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCAATTA CAGGTACAGA TCGTGTAAAA CGGGGAATGG CGGAAATGCA AAAAGGCGGC
GTCATCATGG ACGTGGTGAA TGCGGAACAG GCGAAAATCG CAGAGGCAGC CGGTGCAGTA
GCGGTGATGG CATTGGAACG CGTCCCTGCT GATATTCGTG CCGCTGGCGG TGTCGCGCGC
ATGGCAGATC CGACGGTCAT TGAAGAAGTG ATGAAGGCCG TATCGATTCC TGTTATGGCC
AAAGCGCGTA TCGGTCATTA CGTCGAAGCA CGCGTCCTTG AGGCGTTAGG TGTTGATTAT
ATTGATGAGA GTGAAGTATT AACACCAGCT GATGAAGAAT TTCATATTGA TAAAAGACAA
TTTACCGTTC CGTTTGTTTG CGGTTGTCGC GACTTAGGAG AAGCGTCGCG CCGCATTGCT
GAAGGGGCAT CGATGCTTCG CACAAAAGGA GAACCAGGAA CAGGAAACAT TGTCGAGGCA
GTGCGTCATA TGCGCAAAGT AAATGCGCAA ATACGAAAAG TCGTCAGCAT GAGTGAAGAC
GAGCTTGTGA CAGAAGCGAA GAATTTAGGT GCTCCGGTTG AAGTATTGCG CGAAATTAAG
CGGTTAGGCC GCCTCCCTGT CGTCAACTTT GCCGCAGGCG GTATCGCGAC CCCGGCTGAC
GCGGCATTGA TGATGCATTT AGGTGCAGAT GGGGTATTTG TCGGTTCAGG TATTTTTAAA
TCGGAAAATC CAGAAAAATA TGCGCGGGCG ATCGTTGAAG CAACGGCACA TTATGAAGAT
TACGAGCTAA TCGCCCATTT ATCCAAAGGA TTAGGTAGCG CAATGCGCGG CATTGATGTC
GCATCATTAT TGCCAGAACA ACGTATGCAA GAGCGTGGTT GGTAA
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| Protein sequence | MAITGTDRVK RGMAEMQKGG VIMDVVNAEQ AKIAEAAGAV AVMALERVPA DIRAAGGVAR
MADPTVIEEV MKAVSIPVMA KARIGHYVEA RVLEALGVDY IDESEVLTPA DEEFHIDKRQ
FTVPFVCGCR DLGEASRRIA EGASMLRTKG EPGTGNIVEA VRHMRKVNAQ IRKVVSMSED
ELVTEAKNLG APVEVLREIK RLGRLPVVNF AAGGIATPAD AALMMHLGAD GVFVGSGIFK
SENPEKYARA IVEATAHYED YELIAHLSKG LGSAMRGIDV ASLLPEQRMQ ERGW
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