Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_6361 |
Symbol | |
ID | 7975683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012792 |
Strand | + |
Start bp | 1110485 |
End bp | 1111456 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644796928 |
Product | nitrogen assimilation transcriptional regulator |
Protein accession | YP_002948187 |
Protein GI | 239821002 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.594028 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCTAGGCT CGGCTTTTGC TTGGGGACAC GGCGTGAACC TGCGACGCCT CAAATATTTC GTGAAGATCG TGGACATCGG CAGCCTGACG CAGGCAGCCG AGGTTCTTTT CATCGCCCAG CCCGCACTGA GCCAGCAATT GGCCACGCTC GAGGGCGAGG TGCGCCAGCA GCTGCTGGTG CGCACCAAGC GCGGCGTCAC GCCCACCGAG GCCGGCAAGG TGCTGTACCG GCATGCGCAG ATCATCCTGC GCCAGTGCGA GCAGGCCCGC GTGGACATGG AGGCGGCCGG CGAAGGGCTG TCGGGCCAGG TGTCGGTGGG GCTTGCGCCC GGCACGGCGG CCTCGGCGCT GTCGCTGCCG CTCTTGCGCA CGGTGCGTGC GCGCCACCCC GGCATCCTGC TCTACCTGAA CGAAAACTAC GGCACCACGC TGAGCGAGCT CATCATGAAC GGCCGCATGG ACCTGGCCGT GCTCTATGGC GACAAGGCGA TCCACGGCCT GAGCTTCCTG CCGCTGCTCA AGGAGCCGCT GTTCCTGGTC GGGCCGGCCG CCATGCCGGC GCCGGCGCAG CCGGTGAAGC TGGCCGACCT GCGCGACATC GAGCTCTTCC TGCCGCGCCC CTACAACGTG GTTCGCAAGC TGGTCGACGC GGCCTTCGTG CGCGCGGGCA TGGTGCCGCG CGTGGTGGCC GAGATCGAAT CGGCCTTCAC GCTGACGGCC GCCATTGCCG ACGGGCTGGG CGCCACCATC CTGCCGGCGT CGATGGCGCG CGAAGTGGTG GCGGCCTGCG GGGCCTGGCA GTTCCAGATC GTCGATCCGG TCATCGAGGC GCCGCTCGCG CTGTGCCAGT CCGACCACCT GCCGCTCTCG GAGCCGGCGC AGGCGGTGAA GAGCATCCTG CTCGAACTCG TGGTCGACCT GGCCGGTACC TTCGCGGCCA CGCCCGAACC CGAGCTGGCC GCGCTGTCGT AG
|
Protein sequence | MLGSAFAWGH GVNLRRLKYF VKIVDIGSLT QAAEVLFIAQ PALSQQLATL EGEVRQQLLV RTKRGVTPTE AGKVLYRHAQ IILRQCEQAR VDMEAAGEGL SGQVSVGLAP GTAASALSLP LLRTVRARHP GILLYLNENY GTTLSELIMN GRMDLAVLYG DKAIHGLSFL PLLKEPLFLV GPAAMPAPAQ PVKLADLRDI ELFLPRPYNV VRKLVDAAFV RAGMVPRVVA EIESAFTLTA AIADGLGATI LPASMAREVV AACGAWQFQI VDPVIEAPLA LCQSDHLPLS EPAQAVKSIL LELVVDLAGT FAATPEPELA ALS
|
| |