Gene Vapar_6361 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_6361 
Symbol 
ID7975683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012792 
Strand
Start bp1110485 
End bp1111456 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content70% 
IMG OID644796928 
Productnitrogen assimilation transcriptional regulator 
Protein accessionYP_002948187 
Protein GI239821002 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.594028 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTAGGCT CGGCTTTTGC TTGGGGACAC GGCGTGAACC TGCGACGCCT CAAATATTTC 
GTGAAGATCG TGGACATCGG CAGCCTGACG CAGGCAGCCG AGGTTCTTTT CATCGCCCAG
CCCGCACTGA GCCAGCAATT GGCCACGCTC GAGGGCGAGG TGCGCCAGCA GCTGCTGGTG
CGCACCAAGC GCGGCGTCAC GCCCACCGAG GCCGGCAAGG TGCTGTACCG GCATGCGCAG
ATCATCCTGC GCCAGTGCGA GCAGGCCCGC GTGGACATGG AGGCGGCCGG CGAAGGGCTG
TCGGGCCAGG TGTCGGTGGG GCTTGCGCCC GGCACGGCGG CCTCGGCGCT GTCGCTGCCG
CTCTTGCGCA CGGTGCGTGC GCGCCACCCC GGCATCCTGC TCTACCTGAA CGAAAACTAC
GGCACCACGC TGAGCGAGCT CATCATGAAC GGCCGCATGG ACCTGGCCGT GCTCTATGGC
GACAAGGCGA TCCACGGCCT GAGCTTCCTG CCGCTGCTCA AGGAGCCGCT GTTCCTGGTC
GGGCCGGCCG CCATGCCGGC GCCGGCGCAG CCGGTGAAGC TGGCCGACCT GCGCGACATC
GAGCTCTTCC TGCCGCGCCC CTACAACGTG GTTCGCAAGC TGGTCGACGC GGCCTTCGTG
CGCGCGGGCA TGGTGCCGCG CGTGGTGGCC GAGATCGAAT CGGCCTTCAC GCTGACGGCC
GCCATTGCCG ACGGGCTGGG CGCCACCATC CTGCCGGCGT CGATGGCGCG CGAAGTGGTG
GCGGCCTGCG GGGCCTGGCA GTTCCAGATC GTCGATCCGG TCATCGAGGC GCCGCTCGCG
CTGTGCCAGT CCGACCACCT GCCGCTCTCG GAGCCGGCGC AGGCGGTGAA GAGCATCCTG
CTCGAACTCG TGGTCGACCT GGCCGGTACC TTCGCGGCCA CGCCCGAACC CGAGCTGGCC
GCGCTGTCGT AG
 
Protein sequence
MLGSAFAWGH GVNLRRLKYF VKIVDIGSLT QAAEVLFIAQ PALSQQLATL EGEVRQQLLV 
RTKRGVTPTE AGKVLYRHAQ IILRQCEQAR VDMEAAGEGL SGQVSVGLAP GTAASALSLP
LLRTVRARHP GILLYLNENY GTTLSELIMN GRMDLAVLYG DKAIHGLSFL PLLKEPLFLV
GPAAMPAPAQ PVKLADLRDI ELFLPRPYNV VRKLVDAAFV RAGMVPRVVA EIESAFTLTA
AIADGLGATI LPASMAREVV AACGAWQFQI VDPVIEAPLA LCQSDHLPLS EPAQAVKSIL
LELVVDLAGT FAATPEPELA ALS