Gene Vapar_6358 details

Gene Information

• Locus tag: Vapar_6358
• ID: 7975680
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012792
• Strand: +
• Start bp: 1107858
• End bp: 1108418
• Gene Length: 561 bp
• Protein Length: 186 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 644796925
• Product: hypothetical protein
• Protein accession: YP_002948184
• Protein GI: 239820999

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATATCA ACAAAAACAT CTTTGTCATC GCCACGTTGG CCACAGTGAT GCTCACCGCC 
TGCGGCTCTC GCGGCTCCAC AGTCGCCGAG GCCGACCCAC CGGAGCCCAC GGCCAATGCC 
CGCAACGCGG TGATCCTGCC CGCCATCGGC TACGGCAAGA CCACCAAGGG CGTGCAACTG 
GCCAAGGCCG ACGATGCATG CGATGTTCCC GCCTCGCTGA ACCAGGCCAT CCAGGATCAA 
TTGCTGGCGC CCTACGAGTT CGCGGTGCCG TCGGCTTCGG CCAACGTAGC CGGCGCACCG 
ACTCTGCGCA TCGAGATCAC GGACATCCTG GCCAATGCCG GCGGGCTCTA TGGCGGCCCG 
AAGATCGTGC AGCTGCACGG CGTGCTGGAC CGCCCCGGCG CGGCGCCAGC CCAGTTCACG 
GCGCAGCGTC AGATGTTCAT GTACTTCGGC CTGCCGCGCA GCACCTGCAG CATGGTGGGC 
GTGGTGACCT ATGCGCTGGG CGGCGACATT GCCAAGTGGC TGCAAAACCC CGTGGACGCG 
GCGAAGCTCG GGGAATTGTG A 

 

Protein sequence

MNINKNIFVI ATLATVMLTA CGSRGSTVAE ADPPEPTANA RNAVILPAIG YGKTTKGVQL 
AKADDACDVP ASLNQAIQDQ LLAPYEFAVP SASANVAGAP TLRIEITDIL ANAGGLYGGP 
KIVQLHGVLD RPGAAPAQFT AQRQMFMYFG LPRSTCSMVG VVTYALGGDI AKWLQNPVDA 
AKLGEL