Gene Vapar_6286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_6286 
Symbol 
ID7975502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012792 
Strand
Start bp1023810 
End bp1024715 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content68% 
IMG OID644796856 
ProductADP-ribosylation/Crystallin J1 
Protein accessionYP_002948115 
Protein GI239820930 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1397] ADP-ribosylglycohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000874505 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGACC AGGAGCGATA CCGCGGCTGC CTCCTCGGGC TCGCCTGCGG CGATGCGGTG 
GGCACGACCG TCGAGTTCAT GCCGCGCGGA ACTTTCGAGC CCGTCACCGG CATGGCTGGC
GGCGGCCCAT TCAGGCTGGA GCCGGGCGAA TGGACCGACG ACACCTCGAT GGCGCTGTGC
CTGGCAACGA GCCTGGTCTG GCGGCGCGGC TTCGATGCCG TCGACCAGAT GAACCGCTAC
TGCAACTGGC GCAGCGTCGG CTACCTGAGC AGCAACGGCG AGTGCTTCGA CATCGGCATC
ACGGTGGCCA CGGCGCTGGA CCGCTACCTC GTGACCCGCG ATCCGTTCGC TGGCGACCCC
GACCCCAGGA CGGCCGGCAA CGGCGCGCTG ATGCGGCTCG CACCGGTCCC GATGTACTTT
CGCGCCAGCG CGGACCACAC CTTCCGGTTT GCCGGCGAAA GCACGCGAAC CACGCATGGC
GCGCGCGAAG CCATCGATTG CTCGCAGCTC TTTGCGCTGC AACTGCGGGC AGCGTTGATG
GGCGCAAGCA AGGAGCACAT TCTTGCAACC GCAGTCCCCG AACCCCTGTC CGACAAGGTC
GCAGCCATCG CGTCGGGTGG CTACGTCGGC AAGCCGCGCG AGGCCATCAA GGGATCGGGA
TACTGTGTCG ATTCGCTCGA GGCGGCCCTT TGGTGCTTCT TCGGCACCGG GTCGTTCGAG
GATGCCGTGC TGGCCGCGGC CAACCTGGGA GACGATGCCG ACACCACGGC CGCGATCTGC
GGGCAGCTGG CCGGTGCGCA CTACGGCGCG TCTTCCATTC CGCCAGCCTG GCTCGAGCGA
TTGGCCCTGC GCGGCGACAT CGAAGGCCTC GCCGATCAAC TGCTGGAAGG CGCCGGGCCG
TCCTGA
 
Protein sequence
MKDQERYRGC LLGLACGDAV GTTVEFMPRG TFEPVTGMAG GGPFRLEPGE WTDDTSMALC 
LATSLVWRRG FDAVDQMNRY CNWRSVGYLS SNGECFDIGI TVATALDRYL VTRDPFAGDP
DPRTAGNGAL MRLAPVPMYF RASADHTFRF AGESTRTTHG AREAIDCSQL FALQLRAALM
GASKEHILAT AVPEPLSDKV AAIASGGYVG KPREAIKGSG YCVDSLEAAL WCFFGTGSFE
DAVLAAANLG DDADTTAAIC GQLAGAHYGA SSIPPAWLER LALRGDIEGL ADQLLEGAGP
S