| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6284 |
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| Symbol | |
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| ID | 7975500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 1021026 |
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| End bp | 1022726 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644796854 |
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| Product | NAD+ synthetase |
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| Protein accession | YP_002948113 |
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| Protein GI | 239820928 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0171] NAD synthase |
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| TIGRFAM ID | [TIGR00552] NAD+ synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000396806 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCCGCA TCACTGTCGC CCAGCTCAAC CCCACGATCG GCGACCTGGC CGGCAACACC
GCGCGGATGA TCGAGGCCGC GCGCCGGGCC GCGGCCGACG AGTCCGACCT GGTGGTCTTC
TCCGAGCTGT CGCTCACGGC CTACTACCCG GCCGACCTGC TGGAGGAAGA CGGCTTCATG
GACCGCGTGG AGGAGGCGTT CGGGCAGTTG CTCTCGGCCT CGCGCGAGAT GCCGGCGCTG
CACTGGGCGG TCGGCCTGCC GGCGCGGCGC GAAGGCGCGG GCAAGAAGCT TCGCAACGTG
CTGCGCGTCA TCAGCGCGGG CGAGGTGCGG CTCGAATATG CCAAGCAGCT GCTGCCGACC
TACAACGTCT TCGACGAGCG CCGGCACTTC GAGCCGGGCC CCGACGTGGC GCGCGTGCTG
CGCATCCGCG GCACGCGCGT GGGATTCCTG ATCTGCGAGG ACGGCTGGAA CGACGAGGGC
CAGGACTACC TCGTCAATCC CTTCGACCGC ATGCGCGATG CCGCGCCCGA CCTCGTGGTG
TCGATCAACG CGAGTCCCTC GAACATCGGC AAGCGCGAGC AGCGGCACCG CATCTTCGGC
GCGGCCAGCC GCCGCAATGG CTTGCCCATC CTCTACGTCA ACCAGGTGGG CGGGCACGAC
CAGCTGGTGT ATGACGGCGC CTCGTTCGCC GTCGAGCCGC AGGCCGGCGT GGTGTACGAG
GCGCACCGCT TCGCGGAGGA CGTGAGCACC TTGCGCTTCG AGGACGGCCG CTTCCTCACG
CCGGCCGGCG AAGCACCGCC GCCTGTGCCG CCGCAAGGCC TGCCGACGCT GGAGTTCTAC
CGCCAGCAGA TCGTGCTCGG CCTGCGCGAC TACGCGCGGC GCTGCGGCTT CCGGCAGGCG
GTGGTCGGCT CGTCCGGCGG CATCGATTCG GCGCTGACGC TCGCGCTGGC GGTCGAGGCG
CTGGGCGCGC AGAACGTCGT CGCCATCACC ATGCCGTCGC GCTTTTCCTC GGCGGGATCG
GTGGACGATT CCGAAAGGCT GTGCCGCAAC CTCGGCGTGC CGCTCGAGGC GCATGCCATC
GCGGGCGTCG TCTCGCAGTT CGAGCAAGGC TTCGAGACGG CATTCGGCCA AGGCCTCGAA
GATGTGGCGC TGGAAAATCT GCAGGCGCGC GTGCGCGGCA CGGTCCTCAT GGGCTACTCC
AACAGCTTCG GCCACTTGCT GCTGACCACG GGCAACAAGT CCGAGATCTC GGTCGGCTAC
TGCACGCTGT ACGGCGACAC CAACGGCGGC CTGGGCCTGA TCGGCGACCT CTACAAGACC
GAGGTCTTCG CGTTGTCGCG ACACTTGAAC GCACAGGCCG GACGCGAACT CATCCCGCAG
GCCATCCTCG ACAAGGAACC CTCGGCCGAG CTCGCGCCGG GACAGAAGGA CGCGGACAGC
CTGCCGTCCT ACGAAGTGCT CGACGAAGTC CTCAAGCTGC TGATCGAAGG CCAGCGGCTC
GGGGCACAGG AGTACGAACA GGCGCGCAGC TTCGTCGACC GGCTGCGTGC CACGCCCGAG
GGCGAGGCGC TGGTCGAGCG CATCCGCGGC ATGGTCGCGC GCAACGAGTA CAAGCGGCGG
CAGTCGCCGC CCATCGTTCG GGTCAGGCCC CGGGCATTCG GCTCGGGCCG CCAGATGCCG
ATTGCGGCCC GCTGGAACTG A
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| Protein sequence | MLRITVAQLN PTIGDLAGNT ARMIEAARRA AADESDLVVF SELSLTAYYP ADLLEEDGFM
DRVEEAFGQL LSASREMPAL HWAVGLPARR EGAGKKLRNV LRVISAGEVR LEYAKQLLPT
YNVFDERRHF EPGPDVARVL RIRGTRVGFL ICEDGWNDEG QDYLVNPFDR MRDAAPDLVV
SINASPSNIG KREQRHRIFG AASRRNGLPI LYVNQVGGHD QLVYDGASFA VEPQAGVVYE
AHRFAEDVST LRFEDGRFLT PAGEAPPPVP PQGLPTLEFY RQQIVLGLRD YARRCGFRQA
VVGSSGGIDS ALTLALAVEA LGAQNVVAIT MPSRFSSAGS VDDSERLCRN LGVPLEAHAI
AGVVSQFEQG FETAFGQGLE DVALENLQAR VRGTVLMGYS NSFGHLLLTT GNKSEISVGY
CTLYGDTNGG LGLIGDLYKT EVFALSRHLN AQAGRELIPQ AILDKEPSAE LAPGQKDADS
LPSYEVLDEV LKLLIEGQRL GAQEYEQARS FVDRLRATPE GEALVERIRG MVARNEYKRR
QSPPIVRVRP RAFGSGRQMP IAARWN
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