| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6245 |
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| Symbol | |
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| ID | 7975461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 980839 |
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| End bp | 981633 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 644796815 |
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| Product | ApbE family lipoprotein |
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| Protein accession | YP_002948074 |
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| Protein GI | 239820889 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGGC GCCAGCTGCT GCGCCTGTCG CTCGGCCTGG GCGCGCTGGC CGGTGGCGCG
GCCCTGGCGC CGGCCGTCAC CGCGCTGCAC TGGGGCCGGC GCGACCTGCT GGGCTTCGGC
ACCACGCTGA GCCTGCAGGC CGGGCACGAG CACGAGGCGG TGGTGGAACG TGCGCTGGAC
GAGGGCGTGG CGCTGCTGCG CCGCATCGAG GCGCAGATGA GCCTGTTCGA TCCCGCCAGC
GCGCTCTCGC GGCTGAACCG CGAGGGCCGG CTGGCCTCGC CGCCCGAAGA GCTGCTGGCG
GTGCTGCGCA TCGCGCACGA GGTGTCGCGC GAGAGCCGCG GCGCCTTCGA CGTGACGGTG
CAGCCGCTGT GGGAGGCCTT CGCGGCCGCC CAGCGCGAAG GCCGCCTGCC GGACGCGCGG
GAAGTGGCAG CGGCGCGCGC GCGGGTCGAC TGGCGCGCGC TCGATGCGCG GCGCCGGCTG
GTGCGCTTCG ACGCGCCGGG CATGGCCGTG ACGCTCAACG GCATCGCGCA GGGCTATGCG
GCGGACCGTG TGCGGCAGGC GCTGGCGGCG TGCGGCATCC GGCACGCGCT GGTCGATGCC
GGCGAGTTCG CGCCGCTCGG GCTGCGGGGC GGCACGCAGG CCTGGTCGCT CGGCATCGCC
GACCCTCAGG CCGAATCCGC GCTGATCGCG CGGCTGCTGG CCGACGGGCG CTGCGTGGCC
ACCTCGGCCG ACAGCCAGAC CTTCTTCAGC GCCGACCGCC GGCACCACCA CATCGTCGAT
CCGCACACCG GCTAA
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| Protein sequence | MKRRQLLRLS LGLGALAGGA ALAPAVTALH WGRRDLLGFG TTLSLQAGHE HEAVVERALD
EGVALLRRIE AQMSLFDPAS ALSRLNREGR LASPPEELLA VLRIAHEVSR ESRGAFDVTV
QPLWEAFAAA QREGRLPDAR EVAAARARVD WRALDARRRL VRFDAPGMAV TLNGIAQGYA
ADRVRQALAA CGIRHALVDA GEFAPLGLRG GTQAWSLGIA DPQAESALIA RLLADGRCVA
TSADSQTFFS ADRRHHHIVD PHTG
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