| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6228 |
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| Symbol | |
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| ID | 7975444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 957597 |
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| End bp | 958418 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644796798 |
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| Product | putative esterase |
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| Protein accession | YP_002948057 |
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| Protein GI | 239820872 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2819] Predicted hydrolase of the alpha/beta superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.226912 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTGTCC TTGGACTGAC GGCTTGCGGT GGAGGCGGGG GCGGAGGCGG CAGTGGTGCG
GTTGCTCCGC TGCTTCCATC GGCCACGCAA CCCGCTGCAG TGCCGTCAGC GGCCGGTCGC
CCGATCTCCG ATTCGATCAA ATCGGCTGAG ACTGGTGCGA CTTACCAGCT AACCATCTAT
TTCCCCGCGT CCTATAGCGG GAGCACCAAG GCCTATCCCG TCATCTATGC CCTGGACGGA
GACGCCGTCA ATGCGCCCAG CGGGCGATTC GAAAACTTGA GGGGCATCCT TGAACGCAAA
GGCATCGATG CGGTTCTGGT CGGCATCGGG GGCACATCGC GCCGAAGCAC GGACTACACT
TTTCCGGGCG CCGTGCCGTA CCACGACTTT CTGACGAAGG AACTCGTCCC ATTCATCGAA
TCGAAGTATC GGGCGGACAG TACGAAGCGA ATCCTGACAG GACATTCACT CAGCGGAAGC
ATGACTGGCT ACGCCCTCTT TCTGGAAGGC GCCGGCACCA CCCTCACCTT TTCGCATTTC
CTCTCCTTCG ACGGTTCGTA CGGATATCAG CAAGCGGAGA CTGATACGTA TGAGCAGAAG
ATGTACGAGG TGCGGAAAGA CAAGGCACTT CCCGCAACAT TGATCCTTGC ACGCTGCGGC
GATACCACCC AGTGCAACTA TCAGCCGGTC GATGCGGTCT ATCAAAAGCT CTTGCAACGC
GGTTACTCCG GTTTCCAGAT CGTGGAGAAA ACCTATTCGA CCTCCCATGT GGCCGTCGAT
CTTCCGGCCT TCGAAGATGC ACTCGCCGTG GTTTTCAAGT GA
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| Protein sequence | MLVLGLTACG GGGGGGGSGA VAPLLPSATQ PAAVPSAAGR PISDSIKSAE TGATYQLTIY
FPASYSGSTK AYPVIYALDG DAVNAPSGRF ENLRGILERK GIDAVLVGIG GTSRRSTDYT
FPGAVPYHDF LTKELVPFIE SKYRADSTKR ILTGHSLSGS MTGYALFLEG AGTTLTFSHF
LSFDGSYGYQ QAETDTYEQK MYEVRKDKAL PATLILARCG DTTQCNYQPV DAVYQKLLQR
GYSGFQIVEK TYSTSHVAVD LPAFEDALAV VFK
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