| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6199 |
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| Symbol | |
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| ID | 7975089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 930727 |
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| End bp | 931653 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644796769 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002948028 |
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| Protein GI | 239820843 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.2151 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGACAG AAGCCGACCT GAACCTGCTG TTTGCGTTGA ACGCACTTCT CTCCGAAGGC
AGCGTCGCCA AAGCTGCCGA GCGCCTGGAC CTGAGCGAGT CGGCGATGAG CCGGGCGCTC
GCGCGGCTGC GGGAATCCAC CGGGGACCAG CTCCTCGTGC GCGCGGGCCG CGCCATGGTG
CTCACGCCGC ATGCGCTGGC ATTGCGCGAC CGCGTCAGGG AACTGGTGCA GGAGTCGCGC
GCGGTGCTTC AGCCCGCCGG CGCGAGCATG GACCCCCGCA CGCTCCGGCA CCTGTTCACG
ATACGGGCCA ACGACGGCTT CATCGAGGGC TTCGCGCCCC AGCTGGTGGC CCGCGCCGCG
CGCGAGGCGC CGGGCGTTCG CCTGCGCTTT GCGCCCAAGC CCGACAAGGA TGTCCGGCCT
CTGCGCGAGG GATTGCTCGA TCTGGACATC GGCGTTCTGG GCGAGTCGGG CCCGGAGGTC
CGCGTCCAGG CGCTCTTTCG CGACCGCTTC ATTGCGGTGG TGCGCGATGG CCATCCCCTG
CTCGCCGGAC CCGAGATCAC GGCCGAGCGC TACGCTGCCT GCGACCACGT GGTCACTTCA
CGCCACGGCC GGACCGTGGG GCCGGCGGAC GACGCACTCG CGGCAATGGG CCTGGTGCGC
AACACCGCGG TCGTGGTGCC CAGCTTCGGC ACTGCCTTGT CGATAGCGGC CGCGACCGAC
CTGGTTGCAT TGATACCGTC TTCCTACTTC GAACACCTGA GGGCGCGCGG CACGCTGCGC
TCGTTCCCGC TGCCGATGCC GACCGAGCAG ATCACCGTGT CGCAGATGTG GCACCCGCGC
CTGGATCGGG ACCCTGCGCA CCAGTGGCTG CGCGGGTTGG TGCTGGAGGT TTGCCGGCCA
CTGAACGAGC GGACAAGCGC GTCGTGA
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| Protein sequence | MPTEADLNLL FALNALLSEG SVAKAAERLD LSESAMSRAL ARLRESTGDQ LLVRAGRAMV
LTPHALALRD RVRELVQESR AVLQPAGASM DPRTLRHLFT IRANDGFIEG FAPQLVARAA
REAPGVRLRF APKPDKDVRP LREGLLDLDI GVLGESGPEV RVQALFRDRF IAVVRDGHPL
LAGPEITAER YAACDHVVTS RHGRTVGPAD DALAAMGLVR NTAVVVPSFG TALSIAAATD
LVALIPSSYF EHLRARGTLR SFPLPMPTEQ ITVSQMWHPR LDRDPAHQWL RGLVLEVCRP
LNERTSAS
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